Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHAMP1Q96JM3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.38
CHAMP1Q96JM3 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHAMP1Q96JM3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHAMP1Q96JM3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHAMP1Q96JM3 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 KLF2P3-201ENST00000451977 1087 ntBASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 AC012645.4-201ENST00000610691 1061 ntBASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHAMP1Q96JM3 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 AC005014.1-201ENST00000432006 2976 ntBASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 AC069120.2-201ENST00000524091 540 ntBASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 AC011498.7-201ENST00000624986 2027 ntBASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 AC111170.3-201ENST00000624282 2464 ntBASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHAMP1Q96JM3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHAMP1Q96JM3 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms