Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.64□□□□□ -0.23
LRRC46Q96FV0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.64□□□□□ -0.23
LRRC46Q96FV0 AC091271.1-201ENST00000611877 1162 ntBASIC13.64□□□□□ -0.23
LRRC46Q96FV0 MIR6787-201ENST00000616675 61 ntBASIC13.64□□□□□ -0.23
LRRC46Q96FV0 AC132938.4-201ENST00000623835 848 ntBASIC13.64□□□□□ -0.23
LRRC46Q96FV0 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC46Q96FV0 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC46Q96FV0 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC46Q96FV0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.64□□□□□ -0.23
LRRC46Q96FV0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.64□□□□□ -0.23
LRRC46Q96FV0 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.64□□□□□ -0.23
LRRC46Q96FV0 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LRRC46Q96FV0 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC46Q96FV0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC46Q96FV0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC46Q96FV0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.64□□□□□ -0.23
LRRC46Q96FV0 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC46Q96FV0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC46Q96FV0 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC46Q96FV0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.64□□□□□ -0.23
LRRC46Q96FV0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 AC041040.2-201ENST00000622926 2899 ntBASIC13.63□□□□□ -0.23
LRRC46Q96FV0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 MIR1908-201ENST00000410394 80 ntBASIC13.63□□□□□ -0.23
LRRC46Q96FV0 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 AC106760.1-201ENST00000508690 800 ntBASIC13.63□□□□□ -0.23
LRRC46Q96FV0 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 KRT8P35-201ENST00000483942 1338 ntBASIC13.63□□□□□ -0.23
LRRC46Q96FV0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LRRC46Q96FV0 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC46Q96FV0 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC46Q96FV0 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC46Q96FV0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC46Q96FV0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC46Q96FV0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.62□□□□□ -0.23
LRRC46Q96FV0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.62□□□□□ -0.23
LRRC46Q96FV0 AC117489.1-201ENST00000625169 3217 ntBASIC13.62□□□□□ -0.23
LRRC46Q96FV0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.62□□□□□ -0.23
LRRC46Q96FV0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC46Q96FV0 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC46Q96FV0 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LRRC46Q96FV0 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC46Q96FV0 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC46Q96FV0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC46Q96FV0 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC46Q96FV0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LRRC46Q96FV0 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.62□□□□□ -0.23
LRRC46Q96FV0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 271.1 ms