Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN23Q96B33 AC018638.5-201ENST00000450885 754 ntBASIC14.69□□□□□ -0.06
CLDN23Q96B33 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC14.69□□□□□ -0.06
CLDN23Q96B33 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN23Q96B33 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN23Q96B33 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN23Q96B33 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.69□□□□□ -0.06
CLDN23Q96B33 AL513523.2-202ENST00000427283 2040 ntBASIC14.69□□□□□ -0.06
CLDN23Q96B33 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.69□□□□□ -0.06
CLDN23Q96B33 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN23Q96B33 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN23Q96B33 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN23Q96B33 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN23Q96B33 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN23Q96B33 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN23Q96B33 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.69□□□□□ -0.06
CLDN23Q96B33 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CLDN23Q96B33 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN23Q96B33 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN23Q96B33 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 MRPL37P1-201ENST00000592451 1337 ntBASIC14.68□□□□□ -0.06
CLDN23Q96B33 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN23Q96B33 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN23Q96B33 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN23Q96B33 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN23Q96B33 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN23Q96B33 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN23Q96B33 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN23Q96B33 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN23Q96B33 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN23Q96B33 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN23Q96B33 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN23Q96B33 AC073869.2-201ENST00000417338 1026 ntBASIC14.68□□□□□ -0.06
CLDN23Q96B33 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 ST13P19-201ENST00000442505 1124 ntBASIC14.68□□□□□ -0.06
CLDN23Q96B33 CSNK1G2P1-201ENST00000442675 955 ntBASIC14.68□□□□□ -0.06
CLDN23Q96B33 AL135901.1-201ENST00000451812 333 ntBASIC14.68□□□□□ -0.06
CLDN23Q96B33 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN23Q96B33 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 AC093909.3-201ENST00000504783 336 ntBASIC14.68□□□□□ -0.06
CLDN23Q96B33 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 AC124068.2-201ENST00000569473 1109 ntBASIC14.68□□□□□ -0.06
CLDN23Q96B33 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 AP003392.6-201ENST00000607709 325 ntBASIC14.68□□□□□ -0.06
CLDN23Q96B33 AC011471.3-201ENST00000623576 402 ntBASIC14.68□□□□□ -0.06
CLDN23Q96B33 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN23Q96B33 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN23Q96B33 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN23Q96B33 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN23Q96B33 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CLDN23Q96B33 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN23Q96B33 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN23Q96B33 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN23Q96B33 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN23Q96B33 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN23Q96B33 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN23Q96B33 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN23Q96B33 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN23Q96B33 AP005117.1-202ENST00000581724 1908 ntBASIC14.67□□□□□ -0.06
CLDN23Q96B33 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN23Q96B33 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN23Q96B33 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CLDN23Q96B33 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN23Q96B33 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.67□□□□□ -0.06
CLDN23Q96B33 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN23Q96B33 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN23Q96B33 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN23Q96B33 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN23Q96B33 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN23Q96B33 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN23Q96B33 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC14.67□□□□□ -0.06
CLDN23Q96B33 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
CLDN23Q96B33 AC068867.1-201ENST00000559855 150 ntBASIC14.67□□□□□ -0.06
CLDN23Q96B33 AC002044.2-201ENST00000624910 970 ntBASIC14.67□□□□□ -0.06
CLDN23Q96B33 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLDN23Q96B33 FAM90A21P-201ENST00000510875 1396 ntBASIC14.67□□□□□ -0.06
CLDN23Q96B33 FAM90A15P-201ENST00000514465 1395 ntBASIC14.67□□□□□ -0.06
CLDN23Q96B33 FAM90A6P-201ENST00000515148 1394 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms