Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 AC105206.1-202ENST00000314927 2368 ntBASIC13.37□□□□□ -0.27
RFT1Q96AA3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RFT1Q96AA3 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.37□□□□□ -0.27
RFT1Q96AA3 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFT1Q96AA3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RFT1Q96AA3 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RFT1Q96AA3 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFT1Q96AA3 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFT1Q96AA3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFT1Q96AA3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RFT1Q96AA3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFT1Q96AA3 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.36□□□□□ -0.27
RFT1Q96AA3 KRT8P12-202ENST00000472924 1397 ntBASIC13.36□□□□□ -0.27
RFT1Q96AA3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFT1Q96AA3 AC023090.2-201ENST00000625182 2110 ntBASIC13.36□□□□□ -0.27
RFT1Q96AA3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RFT1Q96AA3 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFT1Q96AA3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFT1Q96AA3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RFT1Q96AA3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 BX842568.4-201ENST00000421222 227 ntBASIC13.36□□□□□ -0.27
RFT1Q96AA3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 AL079307.3-201ENST00000556114 283 ntBASIC13.36□□□□□ -0.27
RFT1Q96AA3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFT1Q96AA3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 AC009093.7-201ENST00000623853 1223 ntBASIC13.36□□□□□ -0.27
RFT1Q96AA3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFT1Q96AA3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFT1Q96AA3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFT1Q96AA3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFT1Q96AA3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFT1Q96AA3 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RFT1Q96AA3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RFT1Q96AA3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RFT1Q96AA3 AC138969.3-201ENST00000546612 1459 ntBASIC13.36□□□□□ -0.27
RFT1Q96AA3 AC138932.2-201ENST00000548268 1459 ntBASIC13.36□□□□□ -0.27
RFT1Q96AA3 AC126755.4-201ENST00000549796 1459 ntBASIC13.36□□□□□ -0.27
RFT1Q96AA3 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
RFT1Q96AA3 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RFT1Q96AA3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.35□□□□□ -0.27
RFT1Q96AA3 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.35□□□□□ -0.27
RFT1Q96AA3 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RFT1Q96AA3 AC055811.4-201ENST00000624039 1754 ntBASIC13.35□□□□□ -0.27
RFT1Q96AA3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
RFT1Q96AA3 AL035456.1-201ENST00000456064 1369 ntBASIC13.35□□□□□ -0.27
RFT1Q96AA3 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RFT1Q96AA3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.35□□□□□ -0.27
RFT1Q96AA3 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RFT1Q96AA3 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
RFT1Q96AA3 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
RFT1Q96AA3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RFT1Q96AA3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms