Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 DPY19L2P5-201ENST00000456300 331 ntBASIC17.83■□□□□ 0.45
SNED1Q8TER0 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC17.83■□□□□ 0.45
SNED1Q8TER0 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC17.83■□□□□ 0.45
SNED1Q8TER0 DNM1P51-201ENST00000558149 522 ntBASIC17.83■□□□□ 0.45
SNED1Q8TER0 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC17.83■□□□□ 0.45
SNED1Q8TER0 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC17.83■□□□□ 0.45
SNED1Q8TER0 AC012073.1-201ENST00000606114 1108 ntBASIC17.83■□□□□ 0.45
SNED1Q8TER0 AC138466.4-201ENST00000623965 852 ntBASIC17.83■□□□□ 0.45
SNED1Q8TER0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNED1Q8TER0 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNED1Q8TER0 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SNED1Q8TER0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNED1Q8TER0 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNED1Q8TER0 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNED1Q8TER0 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.83■□□□□ 0.44
SNED1Q8TER0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SNED1Q8TER0 AC009093.10-201ENST00000641956 1442 ntBASIC17.83■□□□□ 0.44
SNED1Q8TER0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNED1Q8TER0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNED1Q8TER0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.83■□□□□ 0.44
SNED1Q8TER0 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC17.83■□□□□ 0.44
SNED1Q8TER0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SNED1Q8TER0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.82■□□□□ 0.44
SNED1Q8TER0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNED1Q8TER0 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNED1Q8TER0 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SNED1Q8TER0 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
SNED1Q8TER0 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNED1Q8TER0 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNED1Q8TER0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNED1Q8TER0 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.82■□□□□ 0.44
SNED1Q8TER0 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNED1Q8TER0 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNED1Q8TER0 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNED1Q8TER0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNED1Q8TER0 AC093909.3-201ENST00000504783 336 ntBASIC17.82■□□□□ 0.44
SNED1Q8TER0 RNA5SP417-201ENST00000516459 108 ntBASIC17.82■□□□□ 0.44
SNED1Q8TER0 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC17.82■□□□□ 0.44
SNED1Q8TER0 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC17.82■□□□□ 0.44
SNED1Q8TER0 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC17.82■□□□□ 0.44
SNED1Q8TER0 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC17.82■□□□□ 0.44
SNED1Q8TER0 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNED1Q8TER0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SNED1Q8TER0 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SNED1Q8TER0 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNED1Q8TER0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNED1Q8TER0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNED1Q8TER0 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SNED1Q8TER0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNED1Q8TER0 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNED1Q8TER0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.82■□□□□ 0.44
SNED1Q8TER0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNED1Q8TER0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.82■□□□□ 0.44
SNED1Q8TER0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNED1Q8TER0 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SNED1Q8TER0 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNED1Q8TER0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNED1Q8TER0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.82■□□□□ 0.44
SNED1Q8TER0 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC17.82■□□□□ 0.44
SNED1Q8TER0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNED1Q8TER0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNED1Q8TER0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNED1Q8TER0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNED1Q8TER0 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.82■□□□□ 0.44
SNED1Q8TER0 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.81■□□□□ 0.44
SNED1Q8TER0 KRT17P5-201ENST00000332088 839 ntBASIC17.81■□□□□ 0.44
SNED1Q8TER0 RN7SL277P-201ENST00000481521 288 ntBASIC17.81■□□□□ 0.44
SNED1Q8TER0 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.81■□□□□ 0.44
SNED1Q8TER0 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC17.81■□□□□ 0.44
SNED1Q8TER0 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNED1Q8TER0 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNED1Q8TER0 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.81■□□□□ 0.44
SNED1Q8TER0 KRT8P1-201ENST00000557533 1207 ntBASIC17.81■□□□□ 0.44
SNED1Q8TER0 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC17.81■□□□□ 0.44
SNED1Q8TER0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNED1Q8TER0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNED1Q8TER0 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC17.81■□□□□ 0.44
SNED1Q8TER0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.81■□□□□ 0.44
SNED1Q8TER0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNED1Q8TER0 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNED1Q8TER0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNED1Q8TER0 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC17.81■□□□□ 0.44
SNED1Q8TER0 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNED1Q8TER0 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNED1Q8TER0 AP002353.1-201ENST00000528257 1599 ntBASIC17.81■□□□□ 0.44
SNED1Q8TER0 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNED1Q8TER0 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC17.81■□□□□ 0.44
SNED1Q8TER0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNED1Q8TER0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.81■□□□□ 0.44
SNED1Q8TER0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNED1Q8TER0 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNED1Q8TER0 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SNED1Q8TER0 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNED1Q8TER0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.81■□□□□ 0.44
SNED1Q8TER0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SNED1Q8TER0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNED1Q8TER0 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNED1Q8TER0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNED1Q8TER0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNED1Q8TER0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms