Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 AL358472.3-201ENST00000608147 415 ntBASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 AC022748.3-201ENST00000621828 275 ntBASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SHKBP1Q8TBC3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SHKBP1Q8TBC3 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SHKBP1Q8TBC3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.71■□□□□ 0.1
SHKBP1Q8TBC3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.71■□□□□ 0.1
SHKBP1Q8TBC3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SHKBP1Q8TBC3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 LINC00552-201ENST00000625151 2579 ntBASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 RN7SKP175-201ENST00000408472 289 ntBASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 CYP46A4P-201ENST00000414953 267 ntBASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 AC138627.1-207ENST00000641560 1006 ntBASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 KRT8P29-201ENST00000420409 1371 ntBASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.7■□□□□ 0.1
SHKBP1Q8TBC3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 INE2-201ENST00000630399 1874 ntBASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 TMBIM7P-203ENST00000641617 1718 ntBASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 SPTLC1P5-201ENST00000450718 252 ntBASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 AC021723.1-201ENST00000486306 515 ntBASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 AC105129.2-201ENST00000559536 390 ntBASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.69■□□□□ 0.1
SHKBP1Q8TBC3 MIR3619-201ENST00000579667 83 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms