Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CFAP61Q8NHU2 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CFAP61Q8NHU2 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CFAP61Q8NHU2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.31■□□□□ 0.04
CFAP61Q8NHU2 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CFAP61Q8NHU2 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CFAP61Q8NHU2 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CFAP61Q8NHU2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CFAP61Q8NHU2 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.31■□□□□ 0.04
CFAP61Q8NHU2 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CFAP61Q8NHU2 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 AC236430.1-201ENST00000402231 743 ntBASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 AC092337.1-201ENST00000568699 1129 ntBASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 LINC02560-201ENST00000596379 459 ntBASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 AC004233.3-201ENST00000607794 1269 ntBASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 AC004790.1-201ENST00000612686 536 ntBASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 AC009118.2-201ENST00000613275 655 ntBASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CFAP61Q8NHU2 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 AL121723.1-201ENST00000445194 1519 ntBASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 AC023310.3-201ENST00000557027 670 ntBASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 AC100756.1-201ENST00000562736 682 ntBASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 AC138749.3-201ENST00000567691 622 ntBASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 RN7SL204P-201ENST00000582831 262 ntBASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 AC116165.1-201ENST00000611806 668 ntBASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
CFAP61Q8NHU2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.28■□□□□ 0.04
CFAP61Q8NHU2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.28■□□□□ 0.04
CFAP61Q8NHU2 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CFAP61Q8NHU2 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms