Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TMEFF1Q8IYR6 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEFF1Q8IYR6 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEFF1Q8IYR6 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TMEFF1Q8IYR6 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TMEFF1Q8IYR6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 LINC00554-201ENST00000564841 3011 ntBASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 AL627231.1-201ENST00000394467 1125 ntBASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 FAM90A7P-201ENST00000382628 1395 ntBASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 FAM90A23P-201ENST00000400136 1395 ntBASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TMEFF1Q8IYR6 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 AC009884.2-201ENST00000603110 324 ntBASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TMEFF1Q8IYR6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms