Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 ZNF767P-206ENST00000513792 565 ntBASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 DUX4L47-201ENST00000566374 394 ntBASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 AC023090.2-201ENST00000625182 2110 ntBASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 AC018442.1-201ENST00000421439 2061 ntBASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 MSTO2P-201ENST00000314835 1709 ntBASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
HERC4Q5GLZ8 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 ACTG1P3-201ENST00000431775 1114 ntBASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 AC022137.2-201ENST00000503482 481 ntBASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 AC055811.4-201ENST00000624039 1754 ntBASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.78■□□□□ 0.28
HERC4Q5GLZ8 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 KRT8P35-201ENST00000483942 1338 ntBASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 ACTBP8-201ENST00000403258 1108 ntBASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 EIF3FP3-201ENST00000434851 1086 ntBASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 RPL7P3-201ENST00000441388 714 ntBASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 TDH-203ENST00000531764 1110 ntBASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
HERC4Q5GLZ8 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HERC4Q5GLZ8 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HERC4Q5GLZ8 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms