Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC022121.1-201ENST00000484584 579 ntBASIC8.9□□□□□ -0.98
HSPG2P98160 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC8.9□□□□□ -0.98
HSPG2P98160 AC005740.1-201ENST00000515639 522 ntBASIC8.9□□□□□ -0.98
HSPG2P98160 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
HSPG2P98160 MIR4640-201ENST00000581824 90 ntBASIC8.9□□□□□ -0.98
HSPG2P98160 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC8.9□□□□□ -0.98
HSPG2P98160 AC073869.4-201ENST00000620841 800 ntBASIC8.9□□□□□ -0.98
HSPG2P98160 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
HSPG2P98160 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
HSPG2P98160 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
HSPG2P98160 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC8.9□□□□□ -0.98
HSPG2P98160 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC8.9□□□□□ -0.98
HSPG2P98160 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC8.9□□□□□ -0.98
HSPG2P98160 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC8.9□□□□□ -0.98
HSPG2P98160 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
HSPG2P98160 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC8.9□□□□□ -0.98
HSPG2P98160 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
HSPG2P98160 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC8.9□□□□□ -0.98
HSPG2P98160 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
HSPG2P98160 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
HSPG2P98160 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
HSPG2P98160 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
HSPG2P98160 AIG1-203ENST00000367596 559 ntTSL 2 BASIC8.9□□□□□ -0.98
HSPG2P98160 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC8.9□□□□□ -0.98
HSPG2P98160 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC8.9□□□□□ -0.98
HSPG2P98160 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
HSPG2P98160 SNRPCP15-201ENST00000424055 192 ntBASIC8.9□□□□□ -0.98
HSPG2P98160 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
HSPG2P98160 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC8.9□□□□□ -0.98
HSPG2P98160 ISL1-203ENST00000511384 981 ntTSL 5 BASIC8.9□□□□□ -0.98
HSPG2P98160 HPX-213ENST00000615166 826 ntTSL 5 BASIC8.9□□□□□ -0.98
HSPG2P98160 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
HSPG2P98160 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
HSPG2P98160 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC8.9□□□□□ -0.98
HSPG2P98160 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
HSPG2P98160 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
HSPG2P98160 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
HSPG2P98160 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC8.9□□□□□ -0.98
HSPG2P98160 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
HSPG2P98160 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
HSPG2P98160 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC8.9□□□□□ -0.98
HSPG2P98160 TEKT4P2-202ENST00000559466 1312 ntBASIC8.9□□□□□ -0.99
HSPG2P98160 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
HSPG2P98160 AC011270.2-201ENST00000624293 2550 ntBASIC8.9□□□□□ -0.99
HSPG2P98160 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
HSPG2P98160 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
HSPG2P98160 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC8.9□□□□□ -0.99
HSPG2P98160 SAT1-201ENST00000379251 801 ntTSL 2 BASIC8.9□□□□□ -0.99
HSPG2P98160 SAT1-202ENST00000379253 909 ntTSL 2 BASIC8.9□□□□□ -0.99
HSPG2P98160 SAT1-203ENST00000379254 868 ntTSL 3 BASIC8.9□□□□□ -0.99
HSPG2P98160 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
HSPG2P98160 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
HSPG2P98160 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC8.9□□□□□ -0.99
HSPG2P98160 AC092573.1-201ENST00000433054 884 ntBASIC8.9□□□□□ -0.99
HSPG2P98160 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC8.9□□□□□ -0.99
HSPG2P98160 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC8.9□□□□□ -0.99
HSPG2P98160 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
HSPG2P98160 KRT18P62-201ENST00000446618 1287 ntBASIC8.9□□□□□ -0.99
HSPG2P98160 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC8.9□□□□□ -0.99
HSPG2P98160 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC8.9□□□□□ -0.99
HSPG2P98160 CDC37P2-201ENST00000562287 1029 ntBASIC8.9□□□□□ -0.99
HSPG2P98160 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC8.9□□□□□ -0.99
HSPG2P98160 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC8.9□□□□□ -0.99
HSPG2P98160 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC8.9□□□□□ -0.99
HSPG2P98160 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
HSPG2P98160 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.99
HSPG2P98160 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
HSPG2P98160 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
HSPG2P98160 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
HSPG2P98160 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC8.89□□□□□ -0.99
HSPG2P98160 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC8.89□□□□□ -0.99
HSPG2P98160 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC8.89□□□□□ -0.99
HSPG2P98160 STK24P1-201ENST00000455035 1291 ntBASIC8.89□□□□□ -0.99
HSPG2P98160 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC8.89□□□□□ -0.99
HSPG2P98160 MBP-230ENST00000528160 584 ntTSL 5 BASIC8.89□□□□□ -0.99
HSPG2P98160 BATF-202ENST00000555504 361 ntTSL 2 BASIC8.89□□□□□ -0.99
HSPG2P98160 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC8.89□□□□□ -0.99
HSPG2P98160 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC8.89□□□□□ -0.99
HSPG2P98160 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC8.89□□□□□ -0.99
HSPG2P98160 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
HSPG2P98160 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
HSPG2P98160 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC8.89□□□□□ -0.99
HSPG2P98160 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC8.89□□□□□ -0.99
HSPG2P98160 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC8.89□□□□□ -0.99
HSPG2P98160 AP000354.1-201ENST00000396982 456 ntBASIC8.89□□□□□ -0.99
HSPG2P98160 AL954722.1-201ENST00000431238 259 ntBASIC8.89□□□□□ -0.99
HSPG2P98160 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
HSPG2P98160 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC8.89□□□□□ -0.99
HSPG2P98160 TYMSP2-201ENST00000589501 424 ntBASIC8.89□□□□□ -0.99
HSPG2P98160 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms