Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.82□□□□□ -0.04
SRP54P61011 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.82□□□□□ -0.04
SRP54P61011 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 SSR4P1-203ENST00000599569 2260 ntBASIC14.82□□□□□ -0.04
SRP54P61011 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.82□□□□□ -0.04
SRP54P61011 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
SRP54P61011 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.82□□□□□ -0.04
SRP54P61011 AC092384.3-202ENST00000564646 2873 ntBASIC14.82□□□□□ -0.04
SRP54P61011 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
SRP54P61011 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.82□□□□□ -0.04
SRP54P61011 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.82□□□□□ -0.04
SRP54P61011 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.82□□□□□ -0.04
SRP54P61011 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.82□□□□□ -0.04
SRP54P61011 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.82□□□□□ -0.04
SRP54P61011 KRT8P13-201ENST00000463294 1010 ntBASIC14.82□□□□□ -0.04
SRP54P61011 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 ZNF767P-206ENST00000513792 565 ntBASIC14.82□□□□□ -0.04
SRP54P61011 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.82□□□□□ -0.04
SRP54P61011 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SRP54P61011 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.82□□□□□ -0.04
SRP54P61011 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.82□□□□□ -0.04
SRP54P61011 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.82□□□□□ -0.04
SRP54P61011 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SRP54P61011 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.82□□□□□ -0.04
SRP54P61011 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SRP54P61011 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.82□□□□□ -0.04
SRP54P61011 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.82□□□□□ -0.04
SRP54P61011 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
SRP54P61011 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
SRP54P61011 MYO15B-237ENST00000642007 4893 ntBASIC14.82□□□□□ -0.04
SRP54P61011 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 AC023024.2-201ENST00000623561 1993 ntBASIC14.82□□□□□ -0.04
SRP54P61011 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.82□□□□□ -0.04
SRP54P61011 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP54P61011 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.81□□□□□ -0.04
SRP54P61011 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP54P61011 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.81□□□□□ -0.04
SRP54P61011 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SRP54P61011 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.81□□□□□ -0.04
SRP54P61011 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SRP54P61011 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.81□□□□□ -0.04
SRP54P61011 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SRP54P61011 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
SRP54P61011 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP54P61011 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP54P61011 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP54P61011 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SRP54P61011 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP54P61011 AL136309.1-201ENST00000403917 691 ntBASIC14.81□□□□□ -0.04
SRP54P61011 MIR663B-201ENST00000408361 115 ntBASIC14.81□□□□□ -0.04
SRP54P61011 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.81□□□□□ -0.04
SRP54P61011 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.81□□□□□ -0.04
SRP54P61011 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP54P61011 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.81□□□□□ -0.04
SRP54P61011 HSPB1P2-201ENST00000448722 546 ntBASIC14.81□□□□□ -0.04
SRP54P61011 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.81□□□□□ -0.04
SRP54P61011 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.81□□□□□ -0.04
SRP54P61011 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.81□□□□□ -0.04
SRP54P61011 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.81□□□□□ -0.04
SRP54P61011 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP54P61011 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SRP54P61011 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP54P61011 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.81□□□□□ -0.04
SRP54P61011 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP54P61011 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP54P61011 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.81□□□□□ -0.04
SRP54P61011 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP54P61011 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.81□□□□□ -0.04
SRP54P61011 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SRP54P61011 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.81□□□□□ -0.04
SRP54P61011 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.81□□□□□ -0.04
SRP54P61011 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP54P61011 AC126365.1-201ENST00000578585 1514 ntBASIC14.81□□□□□ -0.04
SRP54P61011 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SRP54P61011 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SRP54P61011 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms