Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC11.75□□□□□ -0.53
ERVFC1-1P60608 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
ERVFC1-1P60608 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC11.75□□□□□ -0.53
ERVFC1-1P60608 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC11.75□□□□□ -0.53
ERVFC1-1P60608 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC11.75□□□□□ -0.53
ERVFC1-1P60608 FAM215A-202ENST00000632077 792 ntBASIC11.75□□□□□ -0.53
ERVFC1-1P60608 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC11.75□□□□□ -0.53
ERVFC1-1P60608 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC11.75□□□□□ -0.53
ERVFC1-1P60608 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ERVFC1-1P60608 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ERVFC1-1P60608 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ERVFC1-1P60608 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC11.75□□□□□ -0.53
ERVFC1-1P60608 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ERVFC1-1P60608 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
ERVFC1-1P60608 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ERVFC1-1P60608 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ERVFC1-1P60608 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC11.75□□□□□ -0.53
ERVFC1-1P60608 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ERVFC1-1P60608 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ERVFC1-1P60608 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ERVFC1-1P60608 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC11.75□□□□□ -0.53
ERVFC1-1P60608 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ERVFC1-1P60608 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC11.75□□□□□ -0.53
ERVFC1-1P60608 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ERVFC1-1P60608 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ERVFC1-1P60608 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 AC055811.4-201ENST00000624039 1754 ntBASIC11.74□□□□□ -0.53
ERVFC1-1P60608 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 USO1-201ENST00000264904 4135 ntTSL 2 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 MIR7706-201ENST00000613747 67 ntBASIC11.74□□□□□ -0.53
ERVFC1-1P60608 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 AC148477.8-201ENST00000624298 468 ntBASIC11.74□□□□□ -0.53
ERVFC1-1P60608 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 AC138969.3-201ENST00000546612 1459 ntBASIC11.74□□□□□ -0.53
ERVFC1-1P60608 AC138932.2-201ENST00000548268 1459 ntBASIC11.74□□□□□ -0.53
ERVFC1-1P60608 AC126755.4-201ENST00000549796 1459 ntBASIC11.74□□□□□ -0.53
ERVFC1-1P60608 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
ERVFC1-1P60608 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
ERVFC1-1P60608 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
ERVFC1-1P60608 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC11.73□□□□□ -0.53
ERVFC1-1P60608 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ERVFC1-1P60608 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ERVFC1-1P60608 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ERVFC1-1P60608 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms