Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN8P56748 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN8P56748 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN8P56748 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CLDN8P56748 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.27□□□□□ -0.13
CLDN8P56748 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN8P56748 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN8P56748 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN8P56748 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN8P56748 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.27□□□□□ -0.13
CLDN8P56748 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.26□□□□□ -0.13
CLDN8P56748 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CLDN8P56748 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CLDN8P56748 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN8P56748 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CLDN8P56748 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN8P56748 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN8P56748 EIF3FP3-201ENST00000434851 1086 ntBASIC14.26□□□□□ -0.13
CLDN8P56748 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.26□□□□□ -0.13
CLDN8P56748 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN8P56748 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.26□□□□□ -0.13
CLDN8P56748 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN8P56748 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.26□□□□□ -0.13
CLDN8P56748 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.26□□□□□ -0.13
CLDN8P56748 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN8P56748 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CLDN8P56748 AC090505.1-201ENST00000430515 1834 ntBASIC14.26□□□□□ -0.13
CLDN8P56748 SALL4P5-201ENST00000419001 1760 ntBASIC14.26□□□□□ -0.13
CLDN8P56748 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.26□□□□□ -0.13
CLDN8P56748 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.26□□□□□ -0.13
CLDN8P56748 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CLDN8P56748 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CLDN8P56748 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CLDN8P56748 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CLDN8P56748 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN8P56748 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.26□□□□□ -0.13
CLDN8P56748 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CLDN8P56748 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN8P56748 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN8P56748 AC003102.2-201ENST00000589195 1469 ntBASIC14.25□□□□□ -0.13
CLDN8P56748 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN8P56748 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN8P56748 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CLDN8P56748 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CLDN8P56748 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN8P56748 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN8P56748 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
CLDN8P56748 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN8P56748 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN8P56748 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CLDN8P56748 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN8P56748 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN8P56748 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CLDN8P56748 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN8P56748 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN8P56748 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN8P56748 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN8P56748 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN8P56748 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN8P56748 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN8P56748 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CLDN8P56748 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CLDN8P56748 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN8P56748 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN8P56748 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CLDN8P56748 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
CLDN8P56748 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN8P56748 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.25□□□□□ -0.13
CLDN8P56748 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN8P56748 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN8P56748 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN8P56748 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms