Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH13P55290 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH13P55290 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH13P55290 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH13P55290 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
CDH13P55290 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH13P55290 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH13P55290 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CDH13P55290 AL645937.2-201ENST00000396808 931 ntBASIC14.71□□□□□ -0.05
CDH13P55290 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.71□□□□□ -0.05
CDH13P55290 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CDH13P55290 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH13P55290 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH13P55290 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.71□□□□□ -0.05
CDH13P55290 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.71□□□□□ -0.05
CDH13P55290 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.71□□□□□ -0.05
CDH13P55290 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
CDH13P55290 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.71□□□□□ -0.05
CDH13P55290 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.71□□□□□ -0.05
CDH13P55290 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.71□□□□□ -0.05
CDH13P55290 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.71□□□□□ -0.05
CDH13P55290 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH13P55290 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CDH13P55290 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.71□□□□□ -0.05
CDH13P55290 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH13P55290 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CDH13P55290 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH13P55290 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH13P55290 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH13P55290 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH13P55290 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CDH13P55290 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
CDH13P55290 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CDH13P55290 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDH13P55290 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
CDH13P55290 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDH13P55290 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.71□□□□□ -0.06
CDH13P55290 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.7□□□□□ -0.06
CDH13P55290 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH13P55290 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH13P55290 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CDH13P55290 AC055811.4-201ENST00000624039 1754 ntBASIC14.7□□□□□ -0.06
CDH13P55290 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH13P55290 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH13P55290 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH13P55290 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CDH13P55290 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH13P55290 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH13P55290 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH13P55290 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CDH13P55290 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CDH13P55290 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH13P55290 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.7□□□□□ -0.06
CDH13P55290 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH13P55290 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CDH13P55290 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH13P55290 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH13P55290 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH13P55290 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.7□□□□□ -0.06
CDH13P55290 AC093214.1-201ENST00000511688 1107 ntBASIC14.7□□□□□ -0.06
CDH13P55290 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH13P55290 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.7□□□□□ -0.06
CDH13P55290 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.7□□□□□ -0.06
CDH13P55290 SPDYE22P-201ENST00000582158 798 ntBASIC14.7□□□□□ -0.06
CDH13P55290 BRI3BPP1-201ENST00000594224 787 ntBASIC14.7□□□□□ -0.06
CDH13P55290 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.7□□□□□ -0.06
CDH13P55290 AC093813.1-201ENST00000605066 256 ntBASIC14.7□□□□□ -0.06
CDH13P55290 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.7□□□□□ -0.06
CDH13P55290 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.7□□□□□ -0.06
CDH13P55290 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.7□□□□□ -0.06
CDH13P55290 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.7□□□□□ -0.06
CDH13P55290 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH13P55290 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH13P55290 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH13P55290 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH13P55290 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CDH13P55290 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CDH13P55290 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH13P55290 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CDH13P55290 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH13P55290 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH13P55290 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CDH13P55290 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH13P55290 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH13P55290 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CDH13P55290 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CDH13P55290 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH13P55290 BASP1P1-201ENST00000430708 665 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms