Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 MTDHP3-201ENST00000594186 672 ntBASIC11.58□□□□□ -0.56
RAB4AP20338 AL031055.1-201ENST00000606362 631 ntBASIC11.58□□□□□ -0.56
RAB4AP20338 AC069148.1-201ENST00000608741 768 ntBASIC11.58□□□□□ -0.56
RAB4AP20338 AC116407.4-201ENST00000623319 1061 ntBASIC11.58□□□□□ -0.56
RAB4AP20338 FLII-221ENST00000578558 2377 ntTSL 5 BASIC11.58□□□□□ -0.56
RAB4AP20338 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC11.58□□□□□ -0.56
RAB4AP20338 AC097359.2-201ENST00000604992 2389 ntBASIC11.58□□□□□ -0.56
RAB4AP20338 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC11.58□□□□□ -0.56
RAB4AP20338 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC11.58□□□□□ -0.56
RAB4AP20338 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
RAB4AP20338 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
RAB4AP20338 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.58□□□□□ -0.56
RAB4AP20338 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC11.58□□□□□ -0.56
RAB4AP20338 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.58□□□□□ -0.56
RAB4AP20338 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC11.58□□□□□ -0.56
RAB4AP20338 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RAB4AP20338 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC11.57□□□□□ -0.56
RAB4AP20338 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC11.57□□□□□ -0.56
RAB4AP20338 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC11.57□□□□□ -0.56
RAB4AP20338 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC11.57□□□□□ -0.56
RAB4AP20338 WASH3P-207ENST00000560956 1394 ntBASIC11.57□□□□□ -0.56
RAB4AP20338 FO538757.1-201ENST00000623083 1397 ntBASIC11.57□□□□□ -0.56
RAB4AP20338 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC11.57□□□□□ -0.56
RAB4AP20338 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC11.57□□□□□ -0.56
RAB4AP20338 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
RAB4AP20338 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC11.57□□□□□ -0.56
RAB4AP20338 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC11.57□□□□□ -0.56
RAB4AP20338 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC11.57□□□□□ -0.56
RAB4AP20338 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC11.57□□□□□ -0.56
RAB4AP20338 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC11.57□□□□□ -0.56
RAB4AP20338 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
RAB4AP20338 RPS15P9-201ENST00000494093 319 ntBASIC11.57□□□□□ -0.56
RAB4AP20338 FAM86EP-206ENST00000510506 987 ntBASIC11.57□□□□□ -0.56
RAB4AP20338 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC11.57□□□□□ -0.56
RAB4AP20338 IGHV3OR16-7-201ENST00000604106 360 ntBASIC11.57□□□□□ -0.56
RAB4AP20338 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC11.57□□□□□ -0.56
RAB4AP20338 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC11.57□□□□□ -0.56
RAB4AP20338 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
RAB4AP20338 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
RAB4AP20338 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC11.57□□□□□ -0.56
RAB4AP20338 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
RAB4AP20338 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
RAB4AP20338 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
RAB4AP20338 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
RAB4AP20338 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.57□□□□□ -0.56
RAB4AP20338 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
RAB4AP20338 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
RAB4AP20338 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
RAB4AP20338 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
RAB4AP20338 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
RAB4AP20338 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB4AP20338 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.56□□□□□ -0.56
RAB4AP20338 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms