Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 NME2P1-201ENST00000426182 414 ntBASIC15.15■□□□□ 0.02
HLA-DPA1P20036 AC007969.1-201ENST00000433675 447 ntBASIC15.15■□□□□ 0.02
HLA-DPA1P20036 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 GAPDHP21-201ENST00000450301 1010 ntBASIC15.15■□□□□ 0.02
HLA-DPA1P20036 FO681548.1-201ENST00000455617 1132 ntBASIC15.15■□□□□ 0.02
HLA-DPA1P20036 USP32P1-208ENST00000506594 1164 ntBASIC15.15■□□□□ 0.02
HLA-DPA1P20036 AC106760.1-201ENST00000508690 800 ntBASIC15.15■□□□□ 0.02
HLA-DPA1P20036 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 AC233724.13-201ENST00000598383 410 ntBASIC15.15■□□□□ 0.02
HLA-DPA1P20036 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 AC239800.4-201ENST00000603712 296 ntBASIC15.15■□□□□ 0.02
HLA-DPA1P20036 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 ENPP7P14-201ENST00000621765 1040 ntBASIC15.15■□□□□ 0.02
HLA-DPA1P20036 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HLA-DPA1P20036 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 SLC25A47P1-201ENST00000531577 414 ntBASIC15.14■□□□□ 0.01
HLA-DPA1P20036 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 AC132938.2-201ENST00000579188 680 ntBASIC15.14■□□□□ 0.01
HLA-DPA1P20036 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 AC008735.3-201ENST00000596646 500 ntBASIC15.14■□□□□ 0.01
HLA-DPA1P20036 AL022328.1-201ENST00000610050 478 ntBASIC15.14■□□□□ 0.01
HLA-DPA1P20036 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 AL591163.1-201ENST00000641757 987 ntBASIC15.14■□□□□ 0.01
HLA-DPA1P20036 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 AC063926.2-201ENST00000623766 1308 ntBASIC15.14■□□□□ 0.01
HLA-DPA1P20036 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-DPA1P20036 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DPA1P20036 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms