Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC3P19447 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC3P19447 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.36■□□□□ 0.37
ERCC3P19447 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC3P19447 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC3P19447 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC3P19447 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC3P19447 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
ERCC3P19447 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC3P19447 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC3P19447 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC3P19447 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.36■□□□□ 0.37
ERCC3P19447 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC3P19447 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC3P19447 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC3P19447 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.36■□□□□ 0.37
ERCC3P19447 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC3P19447 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC3P19447 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ERCC3P19447 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ERCC3P19447 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.35■□□□□ 0.37
ERCC3P19447 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.35■□□□□ 0.37
ERCC3P19447 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.35■□□□□ 0.37
ERCC3P19447 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
ERCC3P19447 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.35■□□□□ 0.37
ERCC3P19447 AC026434.2-201ENST00000506094 1078 ntBASIC17.35■□□□□ 0.37
ERCC3P19447 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.35■□□□□ 0.37
ERCC3P19447 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.35■□□□□ 0.37
ERCC3P19447 AC097724.1-201ENST00000609581 426 ntBASIC17.35■□□□□ 0.37
ERCC3P19447 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.35■□□□□ 0.37
ERCC3P19447 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ERCC3P19447 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.35■□□□□ 0.37
ERCC3P19447 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.35■□□□□ 0.37
ERCC3P19447 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.35■□□□□ 0.37
ERCC3P19447 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ERCC3P19447 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.35■□□□□ 0.37
ERCC3P19447 AL157414.3-201ENST00000624276 1954 ntBASIC17.35■□□□□ 0.37
ERCC3P19447 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.35■□□□□ 0.37
ERCC3P19447 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC3P19447 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC3P19447 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.34■□□□□ 0.37
ERCC3P19447 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC3P19447 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC3P19447 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC3P19447 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC3P19447 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ERCC3P19447 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC3P19447 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC3P19447 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC3P19447 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC3P19447 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC3P19447 MIR769-201ENST00000390225 118 ntBASIC17.34■□□□□ 0.37
ERCC3P19447 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
ERCC3P19447 TNRC18P2-201ENST00000417666 2714 ntBASIC17.34■□□□□ 0.37
ERCC3P19447 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.34■□□□□ 0.37
ERCC3P19447 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC3P19447 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC3P19447 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
ERCC3P19447 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.34■□□□□ 0.37
ERCC3P19447 RN7SL769P-201ENST00000469386 295 ntBASIC17.34■□□□□ 0.37
ERCC3P19447 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.34■□□□□ 0.37
ERCC3P19447 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC3P19447 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.34■□□□□ 0.37
ERCC3P19447 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
ERCC3P19447 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.34■□□□□ 0.37
ERCC3P19447 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.34■□□□□ 0.37
ERCC3P19447 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.34■□□□□ 0.37
ERCC3P19447 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.34■□□□□ 0.37
ERCC3P19447 AC022748.3-201ENST00000621828 275 ntBASIC17.34■□□□□ 0.37
ERCC3P19447 C18orf15-201ENST00000623680 2534 ntBASIC17.34■□□□□ 0.37
ERCC3P19447 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.34■□□□□ 0.37
ERCC3P19447 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ERCC3P19447 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ERCC3P19447 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ERCC3P19447 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms