Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.49□□□□□ -0.41
CTSDP07339 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CTSDP07339 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.49□□□□□ -0.41
CTSDP07339 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CTSDP07339 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
CTSDP07339 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CTSDP07339 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.49□□□□□ -0.41
CTSDP07339 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.49□□□□□ -0.41
CTSDP07339 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.49□□□□□ -0.41
CTSDP07339 DNAJB3-201ENST00000446806 729 ntBASIC12.49□□□□□ -0.41
CTSDP07339 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.49□□□□□ -0.41
CTSDP07339 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.49□□□□□ -0.41
CTSDP07339 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.49□□□□□ -0.41
CTSDP07339 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.49□□□□□ -0.41
CTSDP07339 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.49□□□□□ -0.41
CTSDP07339 LINC01115-203ENST00000606068 577 ntBASIC12.49□□□□□ -0.41
CTSDP07339 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CTSDP07339 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.49□□□□□ -0.41
CTSDP07339 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.49□□□□□ -0.41
CTSDP07339 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CTSDP07339 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CTSDP07339 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.49□□□□□ -0.41
CTSDP07339 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CTSDP07339 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CTSDP07339 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CTSDP07339 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.49□□□□□ -0.41
CTSDP07339 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTSDP07339 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 AL137783.1-201ENST00000623494 1896 ntBASIC12.48□□□□□ -0.41
CTSDP07339 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.48□□□□□ -0.41
CTSDP07339 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.48□□□□□ -0.41
CTSDP07339 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.48□□□□□ -0.41
CTSDP07339 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.48□□□□□ -0.41
CTSDP07339 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CTSDP07339 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CTSDP07339 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.48□□□□□ -0.41
CTSDP07339 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CTSDP07339 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CTSDP07339 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CTSDP07339 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
CTSDP07339 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.48□□□□□ -0.41
CTSDP07339 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CTSDP07339 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CTSDP07339 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.48□□□□□ -0.41
CTSDP07339 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CTSDP07339 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 BX842568.4-201ENST00000421222 227 ntBASIC12.48□□□□□ -0.41
CTSDP07339 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.48□□□□□ -0.41
CTSDP07339 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.48□□□□□ -0.41
CTSDP07339 MKNK2P1-201ENST00000437526 628 ntBASIC12.48□□□□□ -0.41
CTSDP07339 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CTSDP07339 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.48□□□□□ -0.41
CTSDP07339 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.48□□□□□ -0.41
CTSDP07339 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.48□□□□□ -0.41
CTSDP07339 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.48□□□□□ -0.41
CTSDP07339 AC092865.5-201ENST00000545435 363 ntBASIC12.48□□□□□ -0.41
CTSDP07339 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.48□□□□□ -0.41
CTSDP07339 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.48□□□□□ -0.41
CTSDP07339 AL589739.1-201ENST00000607720 493 ntBASIC12.48□□□□□ -0.41
CTSDP07339 C20orf181-201ENST00000623918 480 ntBASIC12.48□□□□□ -0.41
CTSDP07339 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CTSDP07339 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CTSDP07339 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CTSDP07339 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms