Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ERBB2P04626 ARSEP1-201ENST00000420443 635 ntBASIC15.72■□□□□ 0.11
ERBB2P04626 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ERBB2P04626 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.72■□□□□ 0.11
ERBB2P04626 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
ERBB2P04626 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.72■□□□□ 0.11
ERBB2P04626 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
ERBB2P04626 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ERBB2P04626 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.72■□□□□ 0.11
ERBB2P04626 KRT17P8-201ENST00000540749 863 ntBASIC15.72■□□□□ 0.11
ERBB2P04626 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ERBB2P04626 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ERBB2P04626 OR10B1P-201ENST00000601666 907 ntBASIC15.72■□□□□ 0.11
ERBB2P04626 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.72■□□□□ 0.11
ERBB2P04626 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.72■□□□□ 0.11
ERBB2P04626 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.72■□□□□ 0.11
ERBB2P04626 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERBB2P04626 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ERBB2P04626 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ERBB2P04626 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERBB2P04626 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ERBB2P04626 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
ERBB2P04626 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERBB2P04626 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ERBB2P04626 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERBB2P04626 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERBB2P04626 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.72■□□□□ 0.11
ERBB2P04626 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ERBB2P04626 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
ERBB2P04626 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.71■□□□□ 0.11
ERBB2P04626 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERBB2P04626 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ERBB2P04626 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.71■□□□□ 0.11
ERBB2P04626 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.71■□□□□ 0.11
ERBB2P04626 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.71■□□□□ 0.11
ERBB2P04626 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.71■□□□□ 0.11
ERBB2P04626 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.71■□□□□ 0.11
ERBB2P04626 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ERBB2P04626 AP000593.2-201ENST00000542775 1433 ntBASIC15.71■□□□□ 0.11
ERBB2P04626 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
ERBB2P04626 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERBB2P04626 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERBB2P04626 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERBB2P04626 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERBB2P04626 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERBB2P04626 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.71■□□□□ 0.11
ERBB2P04626 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ERBB2P04626 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ERBB2P04626 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.71■□□□□ 0.11
ERBB2P04626 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.71■□□□□ 0.11
ERBB2P04626 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERBB2P04626 GCOM2-201ENST00000509133 1104 ntBASIC15.71■□□□□ 0.11
ERBB2P04626 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.71■□□□□ 0.11
ERBB2P04626 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.71■□□□□ 0.11
ERBB2P04626 AC106886.1-201ENST00000568660 600 ntBASIC15.71■□□□□ 0.11
ERBB2P04626 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.71■□□□□ 0.11
ERBB2P04626 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.71■□□□□ 0.11
ERBB2P04626 AL512343.1-201ENST00000605837 169 ntBASIC15.71■□□□□ 0.11
ERBB2P04626 AL162274.1-201ENST00000617191 1098 ntBASIC15.71■□□□□ 0.11
ERBB2P04626 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ERBB2P04626 AC006453.4-201ENST00000636949 1252 ntBASIC15.71■□□□□ 0.11
ERBB2P04626 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERBB2P04626 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERBB2P04626 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERBB2P04626 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERBB2P04626 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ERBB2P04626 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
ERBB2P04626 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.71■□□□□ 0.11
ERBB2P04626 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERBB2P04626 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
ERBB2P04626 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
ERBB2P04626 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.71■□□□□ 0.1
ERBB2P04626 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
ERBB2P04626 AC015656.1-201ENST00000624209 3578 ntBASIC15.71■□□□□ 0.1
ERBB2P04626 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
ERBB2P04626 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
ERBB2P04626 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
ERBB2P04626 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ERBB2P04626 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
ERBB2P04626 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
ERBB2P04626 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERBB2P04626 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ERBB2P04626 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ERBB2P04626 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERBB2P04626 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERBB2P04626 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.7■□□□□ 0.1
ERBB2P04626 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERBB2P04626 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
ERBB2P04626 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERBB2P04626 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.7■□□□□ 0.1
ERBB2P04626 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERBB2P04626 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.7■□□□□ 0.1
ERBB2P04626 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.7■□□□□ 0.1
ERBB2P04626 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.7■□□□□ 0.1
ERBB2P04626 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ERBB2P04626 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.7■□□□□ 0.1
ERBB2P04626 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ERBB2P04626 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ERBB2P04626 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.7■□□□□ 0.1
ERBB2P04626 AC006001.1-201ENST00000325130 474 ntBASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms