Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC16.1■□□□□ 0.17
TUBB4AP04350 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB4AP04350 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB4AP04350 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB4AP04350 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB4AP04350 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB4AP04350 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.1■□□□□ 0.17
TUBB4AP04350 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB4AP04350 AP000347.1-202ENST00000435868 847 ntBASIC16.1■□□□□ 0.17
TUBB4AP04350 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.1■□□□□ 0.17
TUBB4AP04350 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.1■□□□□ 0.17
TUBB4AP04350 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.1■□□□□ 0.17
TUBB4AP04350 RN7SL589P-201ENST00000481268 310 ntBASIC16.1■□□□□ 0.17
TUBB4AP04350 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.1■□□□□ 0.17
TUBB4AP04350 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.1■□□□□ 0.17
TUBB4AP04350 AC034105.1-201ENST00000563488 319 ntBASIC16.1■□□□□ 0.17
TUBB4AP04350 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.1■□□□□ 0.17
TUBB4AP04350 AC092364.2-202ENST00000597012 1073 ntBASIC16.1■□□□□ 0.17
TUBB4AP04350 MIR7706-201ENST00000613747 67 ntBASIC16.1■□□□□ 0.17
TUBB4AP04350 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.1■□□□□ 0.17
TUBB4AP04350 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TUBB4AP04350 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB4AP04350 IL9RP2-201ENST00000423948 1312 ntBASIC16.1■□□□□ 0.17
TUBB4AP04350 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB4AP04350 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB4AP04350 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB4AP04350 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TUBB4AP04350 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB4AP04350 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB4AP04350 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB4AP04350 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TUBB4AP04350 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB4AP04350 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
TUBB4AP04350 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TUBB4AP04350 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TUBB4AP04350 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB4AP04350 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB4AP04350 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB4AP04350 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.09■□□□□ 0.17
TUBB4AP04350 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.09■□□□□ 0.17
TUBB4AP04350 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC16.09■□□□□ 0.17
TUBB4AP04350 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.09■□□□□ 0.17
TUBB4AP04350 Z97205.2-201ENST00000564697 1639 ntBASIC16.09■□□□□ 0.17
TUBB4AP04350 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
TUBB4AP04350 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB4AP04350 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB4AP04350 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TUBB4AP04350 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TUBB4AP04350 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB4AP04350 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB4AP04350 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.09■□□□□ 0.17
TUBB4AP04350 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB4AP04350 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB4AP04350 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.09■□□□□ 0.17
TUBB4AP04350 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
TUBB4AP04350 AC074338.1-201ENST00000416825 156 ntBASIC16.09■□□□□ 0.17
TUBB4AP04350 AC098831.1-202ENST00000438821 336 ntBASIC16.09■□□□□ 0.17
TUBB4AP04350 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.09■□□□□ 0.17
TUBB4AP04350 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
TUBB4AP04350 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.09■□□□□ 0.17
TUBB4AP04350 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.09■□□□□ 0.17
TUBB4AP04350 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
TUBB4AP04350 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.09■□□□□ 0.17
TUBB4AP04350 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.09■□□□□ 0.17
TUBB4AP04350 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB4AP04350 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB4AP04350 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TUBB4AP04350 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TUBB4AP04350 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB4AP04350 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TUBB4AP04350 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB4AP04350 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB4AP04350 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.09■□□□□ 0.17
TUBB4AP04350 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.09■□□□□ 0.17
TUBB4AP04350 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
TUBB4AP04350 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC16.09■□□□□ 0.17
TUBB4AP04350 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB4AP04350 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB4AP04350 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB4AP04350 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.09■□□□□ 0.17
TUBB4AP04350 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB4AP04350 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB4AP04350 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB4AP04350 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB4AP04350 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TUBB4AP04350 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
TUBB4AP04350 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TUBB4AP04350 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TUBB4AP04350 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TUBB4AP04350 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
TUBB4AP04350 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
TUBB4AP04350 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TUBB4AP04350 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TUBB4AP04350 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
TUBB4AP04350 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.08■□□□□ 0.17
TUBB4AP04350 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TUBB4AP04350 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TUBB4AP04350 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC16.08■□□□□ 0.16
TUBB4AP04350 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TUBB4AP04350 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms