Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.06□□□□□ -0.32
UPK1BO75841 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.06□□□□□ -0.32
UPK1BO75841 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UPK1BO75841 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.05□□□□□ -0.32
UPK1BO75841 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.05□□□□□ -0.32
UPK1BO75841 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.05□□□□□ -0.32
UPK1BO75841 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.05□□□□□ -0.32
UPK1BO75841 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC13.05□□□□□ -0.32
UPK1BO75841 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.05□□□□□ -0.32
UPK1BO75841 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 AC215219.1-201ENST00000400706 1817 ntBASIC13.05□□□□□ -0.32
UPK1BO75841 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
UPK1BO75841 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.05□□□□□ -0.32
UPK1BO75841 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
UPK1BO75841 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 NUS1P2-201ENST00000417358 873 ntBASIC13.05□□□□□ -0.32
UPK1BO75841 RBM17P3-201ENST00000417687 1192 ntBASIC13.05□□□□□ -0.32
UPK1BO75841 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.05□□□□□ -0.32
UPK1BO75841 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.05□□□□□ -0.32
UPK1BO75841 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.05□□□□□ -0.32
UPK1BO75841 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.05□□□□□ -0.32
UPK1BO75841 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.05□□□□□ -0.32
UPK1BO75841 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.05□□□□□ -0.32
UPK1BO75841 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
UPK1BO75841 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
UPK1BO75841 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.05□□□□□ -0.32
UPK1BO75841 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC13.05□□□□□ -0.32
UPK1BO75841 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.05□□□□□ -0.32
UPK1BO75841 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
UPK1BO75841 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.05□□□□□ -0.32
UPK1BO75841 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
UPK1BO75841 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
UPK1BO75841 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.05□□□□□ -0.32
UPK1BO75841 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UPK1BO75841 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
UPK1BO75841 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UPK1BO75841 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.04□□□□□ -0.32
UPK1BO75841 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
UPK1BO75841 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK1BO75841 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UPK1BO75841 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.04□□□□□ -0.32
UPK1BO75841 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC13.04□□□□□ -0.32
UPK1BO75841 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
UPK1BO75841 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK1BO75841 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
UPK1BO75841 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK1BO75841 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
UPK1BO75841 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK1BO75841 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
UPK1BO75841 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK1BO75841 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UPK1BO75841 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK1BO75841 AC012531.1-201ENST00000562848 2680 ntBASIC13.04□□□□□ -0.32
UPK1BO75841 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UPK1BO75841 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
UPK1BO75841 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
UPK1BO75841 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UPK1BO75841 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UPK1BO75841 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.04□□□□□ -0.32
UPK1BO75841 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.04□□□□□ -0.32
UPK1BO75841 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
UPK1BO75841 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.04□□□□□ -0.32
UPK1BO75841 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.04□□□□□ -0.32
UPK1BO75841 OR7E47P-204ENST00000575924 449 ntBASIC13.04□□□□□ -0.32
UPK1BO75841 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.04□□□□□ -0.32
UPK1BO75841 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.04□□□□□ -0.32
UPK1BO75841 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.04□□□□□ -0.32
UPK1BO75841 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms