Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 KRT8P34-201ENST00000577607 1044 ntBASIC6.47□□□□□ -1.37
USH2AO75445 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC6.47□□□□□ -1.37
USH2AO75445 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC6.47□□□□□ -1.37
USH2AO75445 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC6.47□□□□□ -1.37
USH2AO75445 AC126755.5-201ENST00000622756 267 ntBASIC6.47□□□□□ -1.37
USH2AO75445 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC6.47□□□□□ -1.37
USH2AO75445 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
USH2AO75445 AL008638.4-201ENST00000624792 1315 ntBASIC6.47□□□□□ -1.37
USH2AO75445 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
USH2AO75445 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 AC019109.1-201ENST00000401725 1874 ntBASIC6.47□□□□□ -1.37
USH2AO75445 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 R3HDM2P2-201ENST00000401880 2116 ntBASIC6.47□□□□□ -1.37
USH2AO75445 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC6.47□□□□□ -1.37
USH2AO75445 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 BRD7P5-201ENST00000299197 1822 ntBASIC6.47□□□□□ -1.37
USH2AO75445 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
USH2AO75445 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC6.47□□□□□ -1.37
USH2AO75445 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
USH2AO75445 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC6.47□□□□□ -1.37
USH2AO75445 EEF1GP8-201ENST00000506566 1154 ntBASIC6.47□□□□□ -1.37
USH2AO75445 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC6.47□□□□□ -1.37
USH2AO75445 NAA40-205ENST00000539656 577 ntTSL 4 BASIC6.47□□□□□ -1.37
USH2AO75445 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC6.47□□□□□ -1.37
USH2AO75445 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC6.47□□□□□ -1.37
USH2AO75445 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC6.47□□□□□ -1.37
USH2AO75445 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC6.47□□□□□ -1.37
USH2AO75445 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC6.47□□□□□ -1.37
USH2AO75445 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
USH2AO75445 SLC9A7P1-201ENST00000554295 3311 ntBASIC6.47□□□□□ -1.37
USH2AO75445 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC6.47□□□□□ -1.37
USH2AO75445 MIR1226-201ENST00000408658 75 ntBASIC6.47□□□□□ -1.37
USH2AO75445 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC6.47□□□□□ -1.37
USH2AO75445 MED15P3-201ENST00000413613 326 ntBASIC6.47□□□□□ -1.37
USH2AO75445 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC6.47□□□□□ -1.37
USH2AO75445 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC6.47□□□□□ -1.37
USH2AO75445 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC6.47□□□□□ -1.37
USH2AO75445 MIR5193-201ENST00000584510 109 ntBASIC6.47□□□□□ -1.37
USH2AO75445 AC124067.4-201ENST00000519691 2379 ntBASIC6.47□□□□□ -1.37
USH2AO75445 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC6.47□□□□□ -1.37
USH2AO75445 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC6.47□□□□□ -1.37
USH2AO75445 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
USH2AO75445 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC6.47□□□□□ -1.37
USH2AO75445 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 AGGF1P1-201ENST00000509500 2073 ntBASIC6.47□□□□□ -1.37
USH2AO75445 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
USH2AO75445 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC6.47□□□□□ -1.37
USH2AO75445 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 MIR611-201ENST00000384869 67 ntBASIC6.47□□□□□ -1.37
USH2AO75445 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC6.47□□□□□ -1.37
USH2AO75445 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 ERP29P1-201ENST00000442902 706 ntBASIC6.47□□□□□ -1.37
USH2AO75445 RN7SL23P-201ENST00000484055 275 ntBASIC6.47□□□□□ -1.37
USH2AO75445 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC6.47□□□□□ -1.37
USH2AO75445 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC6.47□□□□□ -1.37
USH2AO75445 RPL10P8-201ENST00000522888 313 ntBASIC6.47□□□□□ -1.37
USH2AO75445 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC6.47□□□□□ -1.37
USH2AO75445 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC6.47□□□□□ -1.37
USH2AO75445 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC6.47□□□□□ -1.37
USH2AO75445 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC6.47□□□□□ -1.37
USH2AO75445 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 AC092850.2-201ENST00000623821 2697 ntBASIC6.47□□□□□ -1.37
USH2AO75445 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USH2AO75445 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC6.47□□□□□ -1.37
USH2AO75445 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
USH2AO75445 AC006504.5-208ENST00000588784 2401 ntBASIC6.46□□□□□ -1.37
USH2AO75445 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
USH2AO75445 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC6.46□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms