Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 CICP14-201ENST00000629111 2732 ntBASIC15.74■□□□□ 0.11
OPHN1O60890 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
OPHN1O60890 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
OPHN1O60890 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.74■□□□□ 0.11
OPHN1O60890 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
OPHN1O60890 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
OPHN1O60890 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPHN1O60890 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPHN1O60890 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPHN1O60890 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPHN1O60890 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPHN1O60890 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
OPHN1O60890 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
OPHN1O60890 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.74■□□□□ 0.11
OPHN1O60890 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPHN1O60890 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
OPHN1O60890 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
OPHN1O60890 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.74■□□□□ 0.11
OPHN1O60890 FAM21FP-201ENST00000426241 1131 ntBASIC15.74■□□□□ 0.11
OPHN1O60890 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
OPHN1O60890 RN7SL399P-201ENST00000471648 279 ntBASIC15.74■□□□□ 0.11
OPHN1O60890 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.74■□□□□ 0.11
OPHN1O60890 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.74■□□□□ 0.11
OPHN1O60890 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.74■□□□□ 0.11
OPHN1O60890 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.74■□□□□ 0.11
OPHN1O60890 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.74■□□□□ 0.11
OPHN1O60890 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.74■□□□□ 0.11
OPHN1O60890 AL391069.4-201ENST00000609583 481 ntBASIC15.74■□□□□ 0.11
OPHN1O60890 CU634019.7-201ENST00000624153 1185 ntBASIC15.74■□□□□ 0.11
OPHN1O60890 FP236241.2-201ENST00000624906 1185 ntBASIC15.74■□□□□ 0.11
OPHN1O60890 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.74■□□□□ 0.11
OPHN1O60890 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
OPHN1O60890 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
OPHN1O60890 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPHN1O60890 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPHN1O60890 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPHN1O60890 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
OPHN1O60890 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
OPHN1O60890 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPHN1O60890 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.74■□□□□ 0.11
OPHN1O60890 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPHN1O60890 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.73■□□□□ 0.11
OPHN1O60890 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
OPHN1O60890 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPHN1O60890 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPHN1O60890 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPHN1O60890 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.73■□□□□ 0.11
OPHN1O60890 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPHN1O60890 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
OPHN1O60890 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
OPHN1O60890 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPHN1O60890 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPHN1O60890 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPHN1O60890 AC093525.8-201ENST00000624099 1342 ntBASIC15.73■□□□□ 0.11
OPHN1O60890 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
OPHN1O60890 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPHN1O60890 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
OPHN1O60890 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
OPHN1O60890 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
OPHN1O60890 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
OPHN1O60890 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPHN1O60890 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPHN1O60890 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
OPHN1O60890 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPHN1O60890 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPHN1O60890 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
OPHN1O60890 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
OPHN1O60890 AL442647.2-201ENST00000429864 857 ntBASIC15.73■□□□□ 0.11
OPHN1O60890 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.73■□□□□ 0.11
OPHN1O60890 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.73■□□□□ 0.11
OPHN1O60890 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.73■□□□□ 0.11
OPHN1O60890 RNA5SP412-201ENST00000516234 123 ntBASIC15.73■□□□□ 0.11
OPHN1O60890 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.73■□□□□ 0.11
OPHN1O60890 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.73■□□□□ 0.11
OPHN1O60890 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
OPHN1O60890 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.73■□□□□ 0.11
OPHN1O60890 TDH-203ENST00000531764 1110 ntBASIC15.73■□□□□ 0.11
OPHN1O60890 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.73■□□□□ 0.11
OPHN1O60890 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.73■□□□□ 0.11
OPHN1O60890 AC103810.3-201ENST00000583567 96 ntBASIC15.73■□□□□ 0.11
OPHN1O60890 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
OPHN1O60890 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.73■□□□□ 0.11
OPHN1O60890 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPHN1O60890 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPHN1O60890 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPHN1O60890 GRK6P1-201ENST00000400595 1711 ntBASIC15.73■□□□□ 0.11
OPHN1O60890 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPHN1O60890 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.73■□□□□ 0.11
OPHN1O60890 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
OPHN1O60890 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.73■□□□□ 0.11
OPHN1O60890 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.73■□□□□ 0.11
OPHN1O60890 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.73■□□□□ 0.11
OPHN1O60890 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
OPHN1O60890 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 AC067750.1-201ENST00000608826 6545 ntBASIC15.72■□□□□ 0.11
OPHN1O60890 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
OPHN1O60890 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms