Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ3O43525 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ3O43525 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ3O43525 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.99■□□□□ 0.63
KCNQ3O43525 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ3O43525 AC018529.2-202ENST00000611482 3087 ntBASIC18.99■□□□□ 0.63
KCNQ3O43525 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC18.99■□□□□ 0.63
KCNQ3O43525 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ3O43525 KRT18P36-201ENST00000411618 1276 ntBASIC18.99■□□□□ 0.63
KCNQ3O43525 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC18.99■□□□□ 0.63
KCNQ3O43525 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC18.99■□□□□ 0.63
KCNQ3O43525 MIR4722-201ENST00000578292 60 ntBASIC18.99■□□□□ 0.63
KCNQ3O43525 MIR4754-201ENST00000582477 89 ntBASIC18.99■□□□□ 0.63
KCNQ3O43525 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC18.99■□□□□ 0.63
KCNQ3O43525 RETN-203ENST00000629642 400 ntTSL 5 BASIC18.99■□□□□ 0.63
KCNQ3O43525 NAP1L6-202ENST00000641404 1222 ntBASIC18.99■□□□□ 0.63
KCNQ3O43525 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ3O43525 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ3O43525 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ3O43525 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ3O43525 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ3O43525 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ3O43525 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
KCNQ3O43525 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC18.99■□□□□ 0.63
KCNQ3O43525 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ3O43525 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.99■□□□□ 0.63
KCNQ3O43525 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KCNQ3O43525 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.98■□□□□ 0.63
KCNQ3O43525 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNQ3O43525 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.98■□□□□ 0.63
KCNQ3O43525 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNQ3O43525 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KCNQ3O43525 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNQ3O43525 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
KCNQ3O43525 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
KCNQ3O43525 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KCNQ3O43525 TCAF2P1-201ENST00000291129 2421 ntBASIC18.98■□□□□ 0.63
KCNQ3O43525 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
KCNQ3O43525 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNQ3O43525 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KCNQ3O43525 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNQ3O43525 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNQ3O43525 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.98■□□□□ 0.63
KCNQ3O43525 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KCNQ3O43525 AC234782.1-201ENST00000451950 919 ntBASIC18.98■□□□□ 0.63
KCNQ3O43525 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC18.98■□□□□ 0.63
KCNQ3O43525 AC090857.1-201ENST00000527400 390 ntBASIC18.98■□□□□ 0.63
KCNQ3O43525 CFL1-214ENST00000534769 758 ntTSL 2 BASIC18.98■□□□□ 0.63
KCNQ3O43525 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
KCNQ3O43525 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.98■□□□□ 0.63
KCNQ3O43525 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC18.98■□□□□ 0.63
KCNQ3O43525 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC18.98■□□□□ 0.63
KCNQ3O43525 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNQ3O43525 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNQ3O43525 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNQ3O43525 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
KCNQ3O43525 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.98■□□□□ 0.63
KCNQ3O43525 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.98■□□□□ 0.63
KCNQ3O43525 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KCNQ3O43525 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC18.98■□□□□ 0.63
KCNQ3O43525 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNQ3O43525 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.98■□□□□ 0.63
KCNQ3O43525 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC18.98■□□□□ 0.63
KCNQ3O43525 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
KCNQ3O43525 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
KCNQ3O43525 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KCNQ3O43525 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
KCNQ3O43525 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KCNQ3O43525 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KCNQ3O43525 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KCNQ3O43525 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KCNQ3O43525 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
KCNQ3O43525 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC18.97■□□□□ 0.63
KCNQ3O43525 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.97■□□□□ 0.63
KCNQ3O43525 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KCNQ3O43525 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.97■□□□□ 0.63
KCNQ3O43525 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
KCNQ3O43525 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KCNQ3O43525 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
KCNQ3O43525 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KCNQ3O43525 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KCNQ3O43525 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
KCNQ3O43525 FXNP2-201ENST00000411625 547 ntBASIC18.97■□□□□ 0.63
KCNQ3O43525 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC18.97■□□□□ 0.63
KCNQ3O43525 AL035414.1-201ENST00000451327 857 ntBASIC18.97■□□□□ 0.63
KCNQ3O43525 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KCNQ3O43525 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC18.97■□□□□ 0.63
KCNQ3O43525 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC18.97■□□□□ 0.63
KCNQ3O43525 COG4-212ENST00000564653 590 ntTSL 5 BASIC18.97■□□□□ 0.63
KCNQ3O43525 MIR5572-201ENST00000583188 137 ntBASIC18.97■□□□□ 0.63
KCNQ3O43525 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC18.97■□□□□ 0.63
KCNQ3O43525 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC18.97■□□□□ 0.63
KCNQ3O43525 AC128714.1-201ENST00000637035 887 ntBASIC18.97■□□□□ 0.63
KCNQ3O43525 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
KCNQ3O43525 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
KCNQ3O43525 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
KCNQ3O43525 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KCNQ3O43525 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
KCNQ3O43525 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
KCNQ3O43525 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms