Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
DTX4Q9Y2E6 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
DTX4Q9Y2E6 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
DTX4Q9Y2E6 AC140479.7-201ENST00000636301 2332 ntBASIC13.9□□□□□ -0.18
DTX4Q9Y2E6 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DTX4Q9Y2E6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DTX4Q9Y2E6 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.9□□□□□ -0.18
DTX4Q9Y2E6 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DTX4Q9Y2E6 FKBP4P6-201ENST00000457486 1332 ntBASIC13.9□□□□□ -0.19
DTX4Q9Y2E6 INTS4P1-203ENST00000641008 3683 ntBASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 OR8S1-201ENST00000310194 1080 ntBASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 AC006001.1-201ENST00000325130 474 ntBASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 BOLA2P3-201ENST00000404566 256 ntBASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 MIR1202-201ENST00000408529 83 ntBASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 AC026954.1-201ENST00000429771 1293 ntBASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 MIR4259-201ENST00000584466 101 ntBASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 OR10B1P-201ENST00000601666 907 ntBASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 RHOXF1P1-202ENST00000635473 501 ntBASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 AC006453.4-201ENST00000636949 1252 ntBASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 AL354989.2-201ENST00000435838 1540 ntBASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.89□□□□□ -0.19
DTX4Q9Y2E6 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 AC022210.1-201ENST00000449856 793 ntBASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 FTLP10-202ENST00000505798 471 ntBASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
DTX4Q9Y2E6 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms