Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 AP001002.3-201ENST00000623482 206 ntBASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 AC004945.1-201ENST00000416738 983 ntBASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 AL162274.1-201ENST00000617191 1098 ntBASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 AC138951.2-201ENST00000623455 1161 ntBASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGC3Q9UN70 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 AC009093.2-202ENST00000620513 2079 ntBASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 OR10B1P-201ENST00000601666 907 ntBASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGC3Q9UN70 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.77■□□□□ 0.11
PCDHGC3Q9UN70 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.77■□□□□ 0.11
PCDHGC3Q9UN70 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGC3Q9UN70 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGC3Q9UN70 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.77■□□□□ 0.11
PCDHGC3Q9UN70 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.77■□□□□ 0.11
PCDHGC3Q9UN70 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
PCDHGC3Q9UN70 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGC3Q9UN70 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
PCDHGC3Q9UN70 AC097359.2-201ENST00000604992 2389 ntBASIC15.77■□□□□ 0.11
PCDHGC3Q9UN70 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms