Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SCN11AQ9UI33 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SCN11AQ9UI33 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC18.74■□□□□ 0.59
SCN11AQ9UI33 SCARNA12-201ENST00000459155 270 ntBASIC18.74■□□□□ 0.59
SCN11AQ9UI33 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC18.74■□□□□ 0.59
SCN11AQ9UI33 MIR6858-201ENST00000620733 67 ntBASIC18.74■□□□□ 0.59
SCN11AQ9UI33 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCN11AQ9UI33 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SCN11AQ9UI33 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCN11AQ9UI33 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCN11AQ9UI33 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC18.74■□□□□ 0.59
SCN11AQ9UI33 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCN11AQ9UI33 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCN11AQ9UI33 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.74■□□□□ 0.59
SCN11AQ9UI33 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCN11AQ9UI33 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCN11AQ9UI33 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SCN11AQ9UI33 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SCN11AQ9UI33 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SCN11AQ9UI33 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 HPGD-203ENST00000422112 805 ntTSL 2 BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 PIN4P1-201ENST00000451079 396 ntBASIC18.73■□□□□ 0.59
SCN11AQ9UI33 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 AC140658.4-201ENST00000561990 352 ntBASIC18.73■□□□□ 0.59
SCN11AQ9UI33 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 PPP1R2P4-201ENST00000424051 595 ntBASIC18.73■□□□□ 0.59
SCN11AQ9UI33 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 AC022447.6-201ENST00000515522 438 ntBASIC18.73■□□□□ 0.59
SCN11AQ9UI33 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 AC007952.4-201ENST00000573866 637 ntBASIC18.73■□□□□ 0.59
SCN11AQ9UI33 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 AC021016.3-201ENST00000608367 477 ntBASIC18.73■□□□□ 0.59
SCN11AQ9UI33 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC18.73■□□□□ 0.59
SCN11AQ9UI33 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 AL591122.2-201ENST00000624125 1853 ntBASIC18.72■□□□□ 0.59
SCN11AQ9UI33 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 AC067931.2-201ENST00000623655 2003 ntBASIC18.72■□□□□ 0.59
SCN11AQ9UI33 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 AC105137.3-201ENST00000617588 984 ntBASIC18.72■□□□□ 0.59
SCN11AQ9UI33 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SCN11AQ9UI33 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SCN11AQ9UI33 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms