Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 AL157414.3-201ENST00000624276 1954 ntBASIC13.19□□□□□ -0.3
CDH20Q9HBT6 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 LILRP1-201ENST00000444199 1370 ntBASIC13.19□□□□□ -0.3
CDH20Q9HBT6 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 AGAP7P-201ENST00000582299 2062 ntBASIC13.18□□□□□ -0.3
CDH20Q9HBT6 AGAP14-201ENST00000624701 2060 ntBASIC13.18□□□□□ -0.3
CDH20Q9HBT6 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 HLA-K-203ENST00000430151 1046 ntBASIC13.18□□□□□ -0.3
CDH20Q9HBT6 C2orf27AP3-201ENST00000434123 579 ntBASIC13.18□□□□□ -0.3
CDH20Q9HBT6 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 AL354718.3-201ENST00000616414 581 ntBASIC13.18□□□□□ -0.3
CDH20Q9HBT6 CR382287.1-201ENST00000623954 586 ntBASIC13.18□□□□□ -0.3
CDH20Q9HBT6 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CDH20Q9HBT6 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDH20Q9HBT6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms