Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RTFDC1Q9BY42 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 AL590440.2-201ENST00000641973 1595 ntBASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 AC027237.1-201ENST00000560942 655 ntBASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 AL132780.4-201ENST00000624870 1135 ntBASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 AC127024.7-201ENST00000625101 200 ntBASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RTFDC1Q9BY42 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 AC005618.3-201ENST00000624928 458 ntBASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 WASH3P-207ENST00000560956 1394 ntBASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTFDC1Q9BY42 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms