Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USB1Q9BQ65 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USB1Q9BQ65 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 AC005229.1-201ENST00000392885 409 ntBASIC13.61□□□□□ -0.23
USB1Q9BQ65 RPL5P21-201ENST00000404620 815 ntBASIC13.61□□□□□ -0.23
USB1Q9BQ65 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
USB1Q9BQ65 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 AC073310.1-201ENST00000423226 1033 ntBASIC13.61□□□□□ -0.23
USB1Q9BQ65 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 AC234783.1-201ENST00000441761 496 ntBASIC13.61□□□□□ -0.23
USB1Q9BQ65 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 AC005534.1-201ENST00000455709 742 ntTSL 2 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
USB1Q9BQ65 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
USB1Q9BQ65 AL096869.2-202ENST00000557007 1237 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
USB1Q9BQ65 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
USB1Q9BQ65 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 FGA-203ENST00000622532 1130 ntTSL 5 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
USB1Q9BQ65 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USB1Q9BQ65 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
USB1Q9BQ65 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USB1Q9BQ65 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USB1Q9BQ65 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USB1Q9BQ65 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.61□□□□□ -0.23
USB1Q9BQ65 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USB1Q9BQ65 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
USB1Q9BQ65 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
USB1Q9BQ65 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
USB1Q9BQ65 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
USB1Q9BQ65 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
USB1Q9BQ65 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
USB1Q9BQ65 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
USB1Q9BQ65 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
USB1Q9BQ65 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
USB1Q9BQ65 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
USB1Q9BQ65 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
USB1Q9BQ65 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 ARSEP1-201ENST00000420443 635 ntBASIC13.6□□□□□ -0.23
USB1Q9BQ65 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
USB1Q9BQ65 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 AL355864.2-201ENST00000447420 863 ntBASIC13.6□□□□□ -0.23
USB1Q9BQ65 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
USB1Q9BQ65 VDAC1P7-201ENST00000462417 847 ntBASIC13.6□□□□□ -0.23
USB1Q9BQ65 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
USB1Q9BQ65 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
USB1Q9BQ65 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 AP005482.1-201ENST00000563722 1273 ntBASIC13.6□□□□□ -0.23
USB1Q9BQ65 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 CLIC4P2-201ENST00000601934 717 ntBASIC13.6□□□□□ -0.23
USB1Q9BQ65 AC004908.3-201ENST00000610248 625 ntBASIC13.6□□□□□ -0.23
USB1Q9BQ65 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
USB1Q9BQ65 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.6□□□□□ -0.23
USB1Q9BQ65 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
USB1Q9BQ65 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
USB1Q9BQ65 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
USB1Q9BQ65 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
USB1Q9BQ65 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.6□□□□□ -0.23
USB1Q9BQ65 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms