Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHAMP1Q96JM3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.42■□□□□ 0.38
CHAMP1Q96JM3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.42■□□□□ 0.38
CHAMP1Q96JM3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHAMP1Q96JM3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.42■□□□□ 0.38
CHAMP1Q96JM3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.42■□□□□ 0.38
CHAMP1Q96JM3 AC004840.1-201ENST00000636359 365 ntBASIC17.42■□□□□ 0.38
CHAMP1Q96JM3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.42■□□□□ 0.38
CHAMP1Q96JM3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CHAMP1Q96JM3 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC17.42■□□□□ 0.38
CHAMP1Q96JM3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHAMP1Q96JM3 AC005562.1-201ENST00000583030 3219 ntBASIC17.42■□□□□ 0.38
CHAMP1Q96JM3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.42■□□□□ 0.38
CHAMP1Q96JM3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHAMP1Q96JM3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CHAMP1Q96JM3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CHAMP1Q96JM3 AC087499.5-201ENST00000452760 1342 ntBASIC17.42■□□□□ 0.38
CHAMP1Q96JM3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.42■□□□□ 0.38
CHAMP1Q96JM3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17.42■□□□□ 0.38
CHAMP1Q96JM3 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CHAMP1Q96JM3 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.42■□□□□ 0.38
CHAMP1Q96JM3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CHAMP1Q96JM3 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CHAMP1Q96JM3 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHAMP1Q96JM3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 TSEN15P1-201ENST00000423257 515 ntBASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 AL590560.3-201ENST00000623350 461 ntBASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 AC068587.6-202ENST00000641839 5619 ntBASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHAMP1Q96JM3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 AL353779.1-201ENST00000434793 351 ntBASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 AC114501.2-201ENST00000439631 535 ntBASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 AC004066.1-201ENST00000502488 802 ntBASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 AC092337.1-201ENST00000568699 1129 ntBASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 AC107373.2-201ENST00000607735 490 ntBASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 AC008738.7-201ENST00000609744 511 ntBASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 AL662799.1-202ENST00000614205 422 ntBASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 FAM90A12P-201ENST00000519497 2375 ntBASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 FAM90A24P-201ENST00000520792 2369 ntBASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 PCDHA3-202ENST00000532566 4594 ntBASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHAMP1Q96JM3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms