Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CNOT9Q92600 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.89□□□□□ -0.19
CNOT9Q92600 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CNOT9Q92600 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.88□□□□□ -0.19
CNOT9Q92600 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.88□□□□□ -0.19
CNOT9Q92600 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
CNOT9Q92600 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 AC018665.1-201ENST00000622927 1362 ntBASIC13.88□□□□□ -0.19
CNOT9Q92600 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CNOT9Q92600 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.88□□□□□ -0.19
CNOT9Q92600 PIN1P1-201ENST00000412108 996 ntBASIC13.88□□□□□ -0.19
CNOT9Q92600 KLF2P2-201ENST00000416807 1039 ntBASIC13.88□□□□□ -0.19
CNOT9Q92600 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.88□□□□□ -0.19
CNOT9Q92600 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CNOT9Q92600 AC190387.1-201ENST00000551683 408 ntBASIC13.88□□□□□ -0.19
CNOT9Q92600 DUX4L47-201ENST00000566374 394 ntBASIC13.88□□□□□ -0.19
CNOT9Q92600 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.88□□□□□ -0.19
CNOT9Q92600 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.88□□□□□ -0.19
CNOT9Q92600 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.88□□□□□ -0.19
CNOT9Q92600 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.88□□□□□ -0.19
CNOT9Q92600 WFDC1-204ENST00000613603 549 ntBASIC13.88□□□□□ -0.19
CNOT9Q92600 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.88□□□□□ -0.19
CNOT9Q92600 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.88□□□□□ -0.19
CNOT9Q92600 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CNOT9Q92600 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.88□□□□□ -0.19
CNOT9Q92600 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
CNOT9Q92600 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.88□□□□□ -0.19
CNOT9Q92600 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 AL137784.3-201ENST00000623858 2288 ntBASIC13.88□□□□□ -0.19
CNOT9Q92600 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.88□□□□□ -0.19
CNOT9Q92600 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CNOT9Q92600 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNOT9Q92600 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT9Q92600 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT9Q92600 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CNOT9Q92600 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CNOT9Q92600 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CNOT9Q92600 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.87□□□□□ -0.19
CNOT9Q92600 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT9Q92600 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT9Q92600 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT9Q92600 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT9Q92600 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.87□□□□□ -0.19
CNOT9Q92600 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.87□□□□□ -0.19
CNOT9Q92600 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT9Q92600 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT9Q92600 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT9Q92600 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CNOT9Q92600 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.87□□□□□ -0.19
CNOT9Q92600 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT9Q92600 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.87□□□□□ -0.19
CNOT9Q92600 AC114812.1-204ENST00000449669 728 ntBASIC13.87□□□□□ -0.19
CNOT9Q92600 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CNOT9Q92600 AC022616.1-201ENST00000518688 554 ntBASIC13.87□□□□□ -0.19
CNOT9Q92600 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.87□□□□□ -0.19
CNOT9Q92600 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CNOT9Q92600 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.87□□□□□ -0.19
CNOT9Q92600 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.87□□□□□ -0.19
CNOT9Q92600 AC140912.1-201ENST00000577171 1054 ntBASIC13.87□□□□□ -0.19
CNOT9Q92600 CLUHP6-201ENST00000580789 941 ntBASIC13.87□□□□□ -0.19
CNOT9Q92600 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.87□□□□□ -0.19
CNOT9Q92600 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.87□□□□□ -0.19
CNOT9Q92600 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.87□□□□□ -0.19
CNOT9Q92600 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.87□□□□□ -0.19
CNOT9Q92600 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT9Q92600 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CNOT9Q92600 AC113367.3-201ENST00000508316 1912 ntBASIC13.87□□□□□ -0.19
CNOT9Q92600 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.87□□□□□ -0.19
CNOT9Q92600 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.87□□□□□ -0.19
CNOT9Q92600 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT9Q92600 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.87□□□□□ -0.19
CNOT9Q92600 AC005840.4-201ENST00000541242 2494 ntBASIC13.87□□□□□ -0.19
CNOT9Q92600 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNOT9Q92600 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms