Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLHC1Q8NHS4 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CLHC1Q8NHS4 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLHC1Q8NHS4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLHC1Q8NHS4 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.48□□□□□ -0.09
CLHC1Q8NHS4 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
CLHC1Q8NHS4 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLHC1Q8NHS4 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLHC1Q8NHS4 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CLHC1Q8NHS4 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 SPDYE19P-201ENST00000338590 713 ntBASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 GNAQP1-201ENST00000444815 1067 ntBASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 AC026410.3-201ENST00000514280 936 ntBASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 RARRES2P5-201ENST00000564013 466 ntBASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 AL662799.1-202ENST00000614205 422 ntBASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 AC018665.1-201ENST00000622927 1362 ntBASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLHC1Q8NHS4 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 RN7SL399P-201ENST00000471648 279 ntBASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.46□□□□□ -0.09
CLHC1Q8NHS4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms