Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 AL591846.1-201ENST00000451736 433 ntBASIC16.09■□□□□ 0.17
BEST2Q8NFU1 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 AL358472.3-201ENST00000608147 415 ntBASIC16.09■□□□□ 0.17
BEST2Q8NFU1 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 AL136301.1-201ENST00000615830 422 ntBASIC16.09■□□□□ 0.17
BEST2Q8NFU1 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 LINC00528-201ENST00000600723 2160 ntBASIC16.09■□□□□ 0.17
BEST2Q8NFU1 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.09■□□□□ 0.17
BEST2Q8NFU1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
BEST2Q8NFU1 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
BEST2Q8NFU1 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.08■□□□□ 0.17
BEST2Q8NFU1 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
BEST2Q8NFU1 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.17
BEST2Q8NFU1 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.08■□□□□ 0.17
BEST2Q8NFU1 AL161772.1-201ENST00000610494 4412 ntBASIC16.08■□□□□ 0.17
BEST2Q8NFU1 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
BEST2Q8NFU1 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.08■□□□□ 0.17
BEST2Q8NFU1 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
BEST2Q8NFU1 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
BEST2Q8NFU1 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 AC006033.1-201ENST00000440505 426 ntBASIC16.08■□□□□ 0.16
BEST2Q8NFU1 HSPB1P2-201ENST00000448722 546 ntBASIC16.08■□□□□ 0.16
BEST2Q8NFU1 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 AC100850.1-201ENST00000506768 649 ntBASIC16.08■□□□□ 0.16
BEST2Q8NFU1 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.08■□□□□ 0.16
BEST2Q8NFU1 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.08■□□□□ 0.16
BEST2Q8NFU1 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms