Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 LINC01101-201ENST00000622953 1884 ntBASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 AC020910.5-201ENST00000623668 1865 ntBASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 AC140479.7-201ENST00000636301 2332 ntBASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 HILS1-202ENST00000545329 423 ntBASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 SNX29P1-201ENST00000548357 1007 ntBASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB11FIP4Q86YS3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 ANKRD19P-201ENST00000338192 862 ntBASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 AC005229.1-201ENST00000392885 409 ntBASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 AC079776.1-201ENST00000401540 1152 ntBASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 CR383656.12-201ENST00000549567 513 ntBASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 AC025279.2-201ENST00000569730 653 ntBASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 CLUHP2-201ENST00000426660 1303 ntBASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB11FIP4Q86YS3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB11FIP4Q86YS3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB11FIP4Q86YS3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB11FIP4Q86YS3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
RAB11FIP4Q86YS3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms