Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.41■□□□□ 0.38
SSRP1Q08945 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSRP1Q08945 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSRP1Q08945 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSRP1Q08945 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.4■□□□□ 0.38
SSRP1Q08945 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSRP1Q08945 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSRP1Q08945 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSRP1Q08945 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSRP1Q08945 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.4■□□□□ 0.38
SSRP1Q08945 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SSRP1Q08945 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
SSRP1Q08945 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.4■□□□□ 0.38
SSRP1Q08945 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSRP1Q08945 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SSRP1Q08945 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSRP1Q08945 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSRP1Q08945 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.4■□□□□ 0.38
SSRP1Q08945 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.4■□□□□ 0.38
SSRP1Q08945 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSRP1Q08945 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSRP1Q08945 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSRP1Q08945 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SSRP1Q08945 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSRP1Q08945 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SSRP1Q08945 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.4■□□□□ 0.38
SSRP1Q08945 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SSRP1Q08945 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSRP1Q08945 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.4■□□□□ 0.38
SSRP1Q08945 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSRP1Q08945 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.4■□□□□ 0.38
SSRP1Q08945 KRT17P7-201ENST00000451704 1104 ntBASIC17.4■□□□□ 0.38
SSRP1Q08945 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.4■□□□□ 0.38
SSRP1Q08945 MESTP3-201ENST00000503460 968 ntBASIC17.4■□□□□ 0.38
SSRP1Q08945 AC005225.4-201ENST00000557330 545 ntBASIC17.4■□□□□ 0.38
SSRP1Q08945 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.4■□□□□ 0.38
SSRP1Q08945 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SSRP1Q08945 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.4■□□□□ 0.38
SSRP1Q08945 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSRP1Q08945 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.4■□□□□ 0.38
SSRP1Q08945 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSRP1Q08945 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSRP1Q08945 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSRP1Q08945 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSRP1Q08945 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSRP1Q08945 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSRP1Q08945 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SSRP1Q08945 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.4■□□□□ 0.38
SSRP1Q08945 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSRP1Q08945 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSRP1Q08945 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SSRP1Q08945 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
SSRP1Q08945 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SSRP1Q08945 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
SSRP1Q08945 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SSRP1Q08945 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
SSRP1Q08945 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.39■□□□□ 0.37
SSRP1Q08945 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.39■□□□□ 0.37
SSRP1Q08945 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SSRP1Q08945 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSRP1Q08945 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSRP1Q08945 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSRP1Q08945 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
SSRP1Q08945 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSRP1Q08945 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSRP1Q08945 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSRP1Q08945 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.39■□□□□ 0.37
SSRP1Q08945 TPM3P8-201ENST00000330554 643 ntBASIC17.39■□□□□ 0.37
SSRP1Q08945 C2orf27AP3-201ENST00000434123 579 ntBASIC17.39■□□□□ 0.37
SSRP1Q08945 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.39■□□□□ 0.37
SSRP1Q08945 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.39■□□□□ 0.37
SSRP1Q08945 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SSRP1Q08945 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SSRP1Q08945 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.39■□□□□ 0.37
SSRP1Q08945 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.39■□□□□ 0.37
SSRP1Q08945 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.39■□□□□ 0.37
SSRP1Q08945 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.39■□□□□ 0.37
SSRP1Q08945 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.39■□□□□ 0.37
SSRP1Q08945 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.39■□□□□ 0.37
SSRP1Q08945 AL354718.3-201ENST00000616414 581 ntBASIC17.39■□□□□ 0.37
SSRP1Q08945 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.39■□□□□ 0.37
SSRP1Q08945 CR382287.1-201ENST00000623954 586 ntBASIC17.39■□□□□ 0.37
SSRP1Q08945 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.39■□□□□ 0.37
SSRP1Q08945 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.39■□□□□ 0.37
SSRP1Q08945 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSRP1Q08945 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SSRP1Q08945 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC17.39■□□□□ 0.37
SSRP1Q08945 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSRP1Q08945 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.39■□□□□ 0.37
SSRP1Q08945 AL138725.1-201ENST00000407347 1314 ntBASIC17.39■□□□□ 0.37
SSRP1Q08945 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSRP1Q08945 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSRP1Q08945 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSRP1Q08945 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.39■□□□□ 0.37
SSRP1Q08945 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SSRP1Q08945 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSRP1Q08945 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.39■□□□□ 0.37
SSRP1Q08945 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.39■□□□□ 0.37
SSRP1Q08945 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSRP1Q08945 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms