Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
EFNB1P98172 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNB1P98172 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNB1P98172 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNB1P98172 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNB1P98172 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNB1P98172 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNB1P98172 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNB1P98172 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
EFNB1P98172 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNB1P98172 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNB1P98172 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
EFNB1P98172 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.38□□□□□ -0.27
EFNB1P98172 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNB1P98172 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.38□□□□□ -0.27
EFNB1P98172 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.38□□□□□ -0.27
EFNB1P98172 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.38□□□□□ -0.27
EFNB1P98172 KLF2P3-201ENST00000451977 1087 ntBASIC13.38□□□□□ -0.27
EFNB1P98172 RN7SL399P-201ENST00000471648 279 ntBASIC13.38□□□□□ -0.27
EFNB1P98172 SPDYE18-201ENST00000510091 1050 ntBASIC13.38□□□□□ -0.27
EFNB1P98172 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.38□□□□□ -0.27
EFNB1P98172 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
EFNB1P98172 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.38□□□□□ -0.27
EFNB1P98172 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
EFNB1P98172 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
EFNB1P98172 AL049840.4-201ENST00000602422 811 ntBASIC13.38□□□□□ -0.27
EFNB1P98172 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.38□□□□□ -0.27
EFNB1P98172 BX539320.1-201ENST00000623759 877 ntBASIC13.38□□□□□ -0.27
EFNB1P98172 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.38□□□□□ -0.27
EFNB1P98172 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNB1P98172 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
EFNB1P98172 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.38□□□□□ -0.27
EFNB1P98172 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
EFNB1P98172 FAM90A12P-201ENST00000519497 2375 ntBASIC13.38□□□□□ -0.27
EFNB1P98172 FAM90A24P-201ENST00000520792 2369 ntBASIC13.38□□□□□ -0.27
EFNB1P98172 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.38□□□□□ -0.27
EFNB1P98172 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
EFNB1P98172 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
EFNB1P98172 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNB1P98172 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
EFNB1P98172 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
EFNB1P98172 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.38□□□□□ -0.27
EFNB1P98172 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
EFNB1P98172 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
EFNB1P98172 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.38□□□□□ -0.27
EFNB1P98172 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
EFNB1P98172 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNB1P98172 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
EFNB1P98172 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNB1P98172 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNB1P98172 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
EFNB1P98172 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNB1P98172 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
EFNB1P98172 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNB1P98172 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
EFNB1P98172 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNB1P98172 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.37□□□□□ -0.27
EFNB1P98172 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNB1P98172 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
EFNB1P98172 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
EFNB1P98172 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
EFNB1P98172 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
EFNB1P98172 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
EFNB1P98172 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.37□□□□□ -0.27
EFNB1P98172 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.37□□□□□ -0.27
EFNB1P98172 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.37□□□□□ -0.27
EFNB1P98172 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNB1P98172 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNB1P98172 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.37□□□□□ -0.27
EFNB1P98172 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.37□□□□□ -0.27
EFNB1P98172 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.37□□□□□ -0.27
EFNB1P98172 AC007969.1-201ENST00000433675 447 ntBASIC13.37□□□□□ -0.27
EFNB1P98172 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.37□□□□□ -0.27
EFNB1P98172 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.37□□□□□ -0.27
EFNB1P98172 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNB1P98172 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.37□□□□□ -0.27
EFNB1P98172 AC103988.2-201ENST00000561804 725 ntBASIC13.37□□□□□ -0.27
EFNB1P98172 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.37□□□□□ -0.27
EFNB1P98172 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.37□□□□□ -0.27
EFNB1P98172 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.37□□□□□ -0.27
EFNB1P98172 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.37□□□□□ -0.27
EFNB1P98172 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.37□□□□□ -0.27
EFNB1P98172 AL158211.3-201ENST00000607385 239 ntBASIC13.37□□□□□ -0.27
EFNB1P98172 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
EFNB1P98172 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNB1P98172 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.37□□□□□ -0.27
EFNB1P98172 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
EFNB1P98172 AC073548.1-201ENST00000624088 1882 ntBASIC13.37□□□□□ -0.27
EFNB1P98172 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
EFNB1P98172 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
EFNB1P98172 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNB1P98172 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.37□□□□□ -0.27
EFNB1P98172 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
EFNB1P98172 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNB1P98172 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNB1P98172 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
EFNB1P98172 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
EFNB1P98172 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.37□□□□□ -0.27
EFNB1P98172 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
EFNB1P98172 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms