Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
YBX1P67809 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
YBX1P67809 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
YBX1P67809 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
YBX1P67809 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
YBX1P67809 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
YBX1P67809 NUS1P3-201ENST00000423502 862 ntBASIC14.63□□□□□ -0.07
YBX1P67809 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.63□□□□□ -0.07
YBX1P67809 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.63□□□□□ -0.07
YBX1P67809 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
YBX1P67809 FTH1P14-201ENST00000482930 551 ntBASIC14.63□□□□□ -0.07
YBX1P67809 AC026434.2-201ENST00000506094 1078 ntBASIC14.63□□□□□ -0.07
YBX1P67809 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.63□□□□□ -0.07
YBX1P67809 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.63□□□□□ -0.07
YBX1P67809 AC015936.2-201ENST00000593177 259 ntBASIC14.63□□□□□ -0.07
YBX1P67809 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
YBX1P67809 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
YBX1P67809 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
YBX1P67809 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
YBX1P67809 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.63□□□□□ -0.07
YBX1P67809 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
YBX1P67809 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.63□□□□□ -0.07
YBX1P67809 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.63□□□□□ -0.07
YBX1P67809 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
YBX1P67809 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.63□□□□□ -0.07
YBX1P67809 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
YBX1P67809 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
YBX1P67809 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
YBX1P67809 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
YBX1P67809 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.62□□□□□ -0.07
YBX1P67809 AC055811.4-201ENST00000624039 1754 ntBASIC14.62□□□□□ -0.07
YBX1P67809 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.62□□□□□ -0.07
YBX1P67809 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
YBX1P67809 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
YBX1P67809 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
YBX1P67809 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.62□□□□□ -0.07
YBX1P67809 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
YBX1P67809 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
YBX1P67809 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
YBX1P67809 AC023090.2-201ENST00000625182 2110 ntBASIC14.62□□□□□ -0.07
YBX1P67809 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
YBX1P67809 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
YBX1P67809 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
YBX1P67809 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.62□□□□□ -0.07
YBX1P67809 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
YBX1P67809 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
YBX1P67809 AC005229.1-201ENST00000392885 409 ntBASIC14.62□□□□□ -0.07
YBX1P67809 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.62□□□□□ -0.07
YBX1P67809 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
YBX1P67809 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
YBX1P67809 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.62□□□□□ -0.07
YBX1P67809 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
YBX1P67809 KRT18P25-201ENST00000508931 1278 ntBASIC14.62□□□□□ -0.07
YBX1P67809 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.62□□□□□ -0.07
YBX1P67809 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
YBX1P67809 KRT17P8-201ENST00000540749 863 ntBASIC14.62□□□□□ -0.07
YBX1P67809 HILS1-202ENST00000545329 423 ntBASIC14.62□□□□□ -0.07
YBX1P67809 DUX4L47-201ENST00000566374 394 ntBASIC14.62□□□□□ -0.07
YBX1P67809 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
YBX1P67809 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.62□□□□□ -0.07
YBX1P67809 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.62□□□□□ -0.07
YBX1P67809 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
YBX1P67809 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
YBX1P67809 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.62□□□□□ -0.07
YBX1P67809 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
YBX1P67809 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.62□□□□□ -0.07
YBX1P67809 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.62□□□□□ -0.07
YBX1P67809 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
YBX1P67809 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.62□□□□□ -0.07
YBX1P67809 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
YBX1P67809 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
YBX1P67809 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
YBX1P67809 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
YBX1P67809 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.62□□□□□ -0.07
YBX1P67809 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
YBX1P67809 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.62□□□□□ -0.07
YBX1P67809 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
YBX1P67809 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
YBX1P67809 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
YBX1P67809 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
YBX1P67809 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
YBX1P67809 LRRC59-203ENST00000576448 1531 ntBASIC14.61□□□□□ -0.07
YBX1P67809 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
YBX1P67809 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.61□□□□□ -0.07
YBX1P67809 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
YBX1P67809 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.61□□□□□ -0.07
YBX1P67809 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
YBX1P67809 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
YBX1P67809 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
YBX1P67809 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.61□□□□□ -0.07
YBX1P67809 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
YBX1P67809 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
YBX1P67809 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
YBX1P67809 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.61□□□□□ -0.07
YBX1P67809 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
YBX1P67809 ANKRD19P-201ENST00000338192 862 ntBASIC14.61□□□□□ -0.07
YBX1P67809 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
YBX1P67809 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
YBX1P67809 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
YBX1P67809 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms