Protein–RNA interactions for Protein: P59665

DEFA1, Neutrophil defensin 1, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA1P59665 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
DEFA1P59665 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
DEFA1P59665 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
DEFA1P59665 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
DEFA1P59665 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC13.19□□□□□ -0.3
DEFA1P59665 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
DEFA1P59665 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA1P59665 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
DEFA1P59665 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
DEFA1P59665 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.18□□□□□ -0.3
DEFA1P59665 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DEFA1P59665 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DEFA1P59665 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.18□□□□□ -0.3
DEFA1P59665 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DEFA1P59665 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.18□□□□□ -0.3
DEFA1P59665 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DEFA1P59665 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.18□□□□□ -0.3
DEFA1P59665 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.18□□□□□ -0.3
DEFA1P59665 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DEFA1P59665 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC13.18□□□□□ -0.3
DEFA1P59665 KHSRPP1-201ENST00000427983 1768 ntBASIC13.18□□□□□ -0.3
DEFA1P59665 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.18□□□□□ -0.3
DEFA1P59665 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.18□□□□□ -0.3
DEFA1P59665 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.18□□□□□ -0.3
DEFA1P59665 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.18□□□□□ -0.3
DEFA1P59665 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
DEFA1P59665 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
DEFA1P59665 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.18□□□□□ -0.3
DEFA1P59665 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.18□□□□□ -0.3
DEFA1P59665 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DEFA1P59665 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
DEFA1P59665 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.18□□□□□ -0.3
DEFA1P59665 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DEFA1P59665 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DEFA1P59665 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DEFA1P59665 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
DEFA1P59665 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DEFA1P59665 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DEFA1P59665 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC13.18□□□□□ -0.3
DEFA1P59665 AP001972.5-201ENST00000624624 2338 ntBASIC13.18□□□□□ -0.3
DEFA1P59665 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DEFA1P59665 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
DEFA1P59665 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
DEFA1P59665 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DEFA1P59665 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DEFA1P59665 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DEFA1P59665 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
DEFA1P59665 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DEFA1P59665 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DEFA1P59665 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DEFA1P59665 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.18□□□□□ -0.3
DEFA1P59665 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
DEFA1P59665 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
DEFA1P59665 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC13.17□□□□□ -0.3
DEFA1P59665 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA1P59665 AC024075.2-201ENST00000598112 1473 ntBASIC13.17□□□□□ -0.3
DEFA1P59665 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA1P59665 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA1P59665 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA1P59665 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA1P59665 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA1P59665 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA1P59665 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.17□□□□□ -0.3
DEFA1P59665 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA1P59665 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA1P59665 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA1P59665 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
DEFA1P59665 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
DEFA1P59665 MIR718-201ENST00000390190 70 ntBASIC13.17□□□□□ -0.3
DEFA1P59665 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
DEFA1P59665 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.17□□□□□ -0.3
DEFA1P59665 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.17□□□□□ -0.3
DEFA1P59665 POM121L3P-201ENST00000419331 1163 ntBASIC13.17□□□□□ -0.3
DEFA1P59665 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.17□□□□□ -0.3
DEFA1P59665 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.17□□□□□ -0.3
DEFA1P59665 SPDYE13P-201ENST00000445314 798 ntBASIC13.17□□□□□ -0.3
DEFA1P59665 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
DEFA1P59665 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA1P59665 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.17□□□□□ -0.3
DEFA1P59665 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA1P59665 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
DEFA1P59665 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.17□□□□□ -0.3
DEFA1P59665 AC024267.1-201ENST00000582320 895 ntBASIC13.17□□□□□ -0.3
DEFA1P59665 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
DEFA1P59665 AC011498.5-201ENST00000592027 486 ntBASIC13.17□□□□□ -0.3
DEFA1P59665 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.17□□□□□ -0.3
DEFA1P59665 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA1P59665 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
DEFA1P59665 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.17□□□□□ -0.3
DEFA1P59665 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.17□□□□□ -0.3
DEFA1P59665 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
DEFA1P59665 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
DEFA1P59665 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
DEFA1P59665 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.17□□□□□ -0.3
DEFA1P59665 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
DEFA1P59665 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms