Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MAGEA5-201ENST00000446757 942 ntBASIC17.49■□□□□ 0.39
RHBDL3P58872 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RHBDL3P58872 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.49■□□□□ 0.39
RHBDL3P58872 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.49■□□□□ 0.39
RHBDL3P58872 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.49■□□□□ 0.39
RHBDL3P58872 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RHBDL3P58872 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.49■□□□□ 0.39
RHBDL3P58872 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.49■□□□□ 0.39
RHBDL3P58872 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.49■□□□□ 0.39
RHBDL3P58872 MIR4722-201ENST00000578292 60 ntBASIC17.49■□□□□ 0.39
RHBDL3P58872 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
RHBDL3P58872 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RHBDL3P58872 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.49■□□□□ 0.39
RHBDL3P58872 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RHBDL3P58872 AJ011931.1-201ENST00000618749 2492 ntBASIC17.49■□□□□ 0.39
RHBDL3P58872 LINC01165-201ENST00000445190 1623 ntBASIC17.49■□□□□ 0.39
RHBDL3P58872 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.49■□□□□ 0.39
RHBDL3P58872 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RHBDL3P58872 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RHBDL3P58872 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RHBDL3P58872 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RHBDL3P58872 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RHBDL3P58872 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.49■□□□□ 0.39
RHBDL3P58872 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RHBDL3P58872 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RHBDL3P58872 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RHBDL3P58872 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RHBDL3P58872 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RHBDL3P58872 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RHBDL3P58872 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.48■□□□□ 0.39
RHBDL3P58872 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RHBDL3P58872 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RHBDL3P58872 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RHBDL3P58872 KHSRPP1-201ENST00000427983 1768 ntBASIC17.48■□□□□ 0.39
RHBDL3P58872 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RHBDL3P58872 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RHBDL3P58872 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RHBDL3P58872 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.48■□□□□ 0.39
RHBDL3P58872 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RHBDL3P58872 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RHBDL3P58872 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RHBDL3P58872 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RHBDL3P58872 OR2K2-202ENST00000374428 1038 ntBASIC17.48■□□□□ 0.39
RHBDL3P58872 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RHBDL3P58872 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.48■□□□□ 0.39
RHBDL3P58872 OR2R1P-201ENST00000441404 914 ntBASIC17.48■□□□□ 0.39
RHBDL3P58872 TMEM198B-204ENST00000484016 896 ntBASIC17.48■□□□□ 0.39
RHBDL3P58872 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC17.48■□□□□ 0.39
RHBDL3P58872 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RHBDL3P58872 HPN-206ENST00000597419 1212 ntTSL 5 BASIC17.48■□□□□ 0.39
RHBDL3P58872 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.48■□□□□ 0.39
RHBDL3P58872 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.48■□□□□ 0.39
RHBDL3P58872 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RHBDL3P58872 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RHBDL3P58872 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.48■□□□□ 0.39
RHBDL3P58872 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RHBDL3P58872 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RHBDL3P58872 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RHBDL3P58872 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RHBDL3P58872 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RHBDL3P58872 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RHBDL3P58872 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RHBDL3P58872 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RHBDL3P58872 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHBDL3P58872 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHBDL3P58872 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHBDL3P58872 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.47■□□□□ 0.39
RHBDL3P58872 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHBDL3P58872 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RHBDL3P58872 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RHBDL3P58872 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHBDL3P58872 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHBDL3P58872 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHBDL3P58872 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHBDL3P58872 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHBDL3P58872 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHBDL3P58872 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RHBDL3P58872 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHBDL3P58872 FXNP2-201ENST00000411625 547 ntBASIC17.47■□□□□ 0.39
RHBDL3P58872 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.47■□□□□ 0.39
RHBDL3P58872 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.47■□□□□ 0.39
RHBDL3P58872 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.47■□□□□ 0.39
RHBDL3P58872 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.47■□□□□ 0.39
RHBDL3P58872 AC026803.1-201ENST00000569130 274 ntBASIC17.47■□□□□ 0.39
RHBDL3P58872 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.47■□□□□ 0.39
RHBDL3P58872 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RHBDL3P58872 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RHBDL3P58872 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.47■□□□□ 0.39
RHBDL3P58872 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RHBDL3P58872 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHBDL3P58872 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RHBDL3P58872 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.47■□□□□ 0.39
RHBDL3P58872 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.47■□□□□ 0.39
RHBDL3P58872 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHBDL3P58872 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHBDL3P58872 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHBDL3P58872 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RHBDL3P58872 TCAF2P1-201ENST00000291129 2421 ntBASIC17.47■□□□□ 0.39
RHBDL3P58872 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
RHBDL3P58872 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms