Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.4□□□□□ -0.26
GFRA1P56159 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.4□□□□□ -0.26
GFRA1P56159 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GFRA1P56159 AL118558.3-201ENST00000607414 1079 ntBASIC13.4□□□□□ -0.26
GFRA1P56159 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GFRA1P56159 AC007292.2-201ENST00000593524 1812 ntBASIC13.4□□□□□ -0.26
GFRA1P56159 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GFRA1P56159 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.4□□□□□ -0.26
GFRA1P56159 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.4□□□□□ -0.26
GFRA1P56159 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.4□□□□□ -0.26
GFRA1P56159 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.4□□□□□ -0.26
GFRA1P56159 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.4□□□□□ -0.26
GFRA1P56159 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.4□□□□□ -0.26
GFRA1P56159 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GFRA1P56159 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
GFRA1P56159 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.4□□□□□ -0.26
GFRA1P56159 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GFRA1P56159 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
GFRA1P56159 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.39□□□□□ -0.27
GFRA1P56159 AC018735.1-201ENST00000437208 1502 ntBASIC13.39□□□□□ -0.27
GFRA1P56159 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.39□□□□□ -0.27
GFRA1P56159 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.39□□□□□ -0.27
GFRA1P56159 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.39□□□□□ -0.27
GFRA1P56159 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.39□□□□□ -0.27
GFRA1P56159 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.39□□□□□ -0.27
GFRA1P56159 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.39□□□□□ -0.27
GFRA1P56159 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
GFRA1P56159 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.39□□□□□ -0.27
GFRA1P56159 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
GFRA1P56159 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.39□□□□□ -0.27
GFRA1P56159 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.39□□□□□ -0.27
GFRA1P56159 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 AC009955.4-201ENST00000597192 544 ntBASIC13.39□□□□□ -0.27
GFRA1P56159 AL022328.3-201ENST00000607943 679 ntBASIC13.39□□□□□ -0.27
GFRA1P56159 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
GFRA1P56159 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.39□□□□□ -0.27
GFRA1P56159 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.39□□□□□ -0.27
GFRA1P56159 AC020907.1-201ENST00000616460 1350 ntBASIC13.39□□□□□ -0.27
GFRA1P56159 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 AC006058.4-201ENST00000624016 1670 ntBASIC13.39□□□□□ -0.27
GFRA1P56159 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
GFRA1P56159 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 AC023824.1-201ENST00000562945 2975 ntBASIC13.39□□□□□ -0.27
GFRA1P56159 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GFRA1P56159 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GFRA1P56159 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GFRA1P56159 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GFRA1P56159 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.38□□□□□ -0.27
GFRA1P56159 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
GFRA1P56159 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.38□□□□□ -0.27
GFRA1P56159 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
GFRA1P56159 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GFRA1P56159 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GFRA1P56159 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
GFRA1P56159 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.38□□□□□ -0.27
GFRA1P56159 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GFRA1P56159 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
GFRA1P56159 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.38□□□□□ -0.27
GFRA1P56159 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
GFRA1P56159 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.38□□□□□ -0.27
GFRA1P56159 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.38□□□□□ -0.27
GFRA1P56159 AC004898.1-201ENST00000451057 766 ntBASIC13.38□□□□□ -0.27
GFRA1P56159 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GFRA1P56159 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.38□□□□□ -0.27
GFRA1P56159 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GFRA1P56159 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GFRA1P56159 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GFRA1P56159 DUX4L46-201ENST00000566845 751 ntBASIC13.38□□□□□ -0.27
GFRA1P56159 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.38□□□□□ -0.27
GFRA1P56159 MIR4783-201ENST00000580343 82 ntBASIC13.38□□□□□ -0.27
GFRA1P56159 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.38□□□□□ -0.27
GFRA1P56159 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.38□□□□□ -0.27
GFRA1P56159 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
GFRA1P56159 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
GFRA1P56159 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GFRA1P56159 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
GFRA1P56159 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.38□□□□□ -0.27
GFRA1P56159 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.38□□□□□ -0.27
GFRA1P56159 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms