Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH3P22223 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.82□□□□□ -0.04
CDH3P22223 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
CDH3P22223 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH3P22223 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH3P22223 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDH3P22223 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDH3P22223 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH3P22223 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CDH3P22223 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CDH3P22223 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
CDH3P22223 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH3P22223 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH3P22223 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CDH3P22223 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CDH3P22223 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH3P22223 MIR1909-201ENST00000411312 80 ntBASIC14.81□□□□□ -0.04
CDH3P22223 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH3P22223 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.81□□□□□ -0.04
CDH3P22223 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.81□□□□□ -0.04
CDH3P22223 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CDH3P22223 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH3P22223 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH3P22223 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH3P22223 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH3P22223 REXO1L2P-201ENST00000425429 2069 ntBASIC14.81□□□□□ -0.04
CDH3P22223 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CDH3P22223 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.81□□□□□ -0.04
CDH3P22223 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CDH3P22223 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH3P22223 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDH3P22223 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.81□□□□□ -0.04
CDH3P22223 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
CDH3P22223 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH3P22223 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH3P22223 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CDH3P22223 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH3P22223 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CDH3P22223 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH3P22223 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH3P22223 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CDH3P22223 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH3P22223 NUS1P3-201ENST00000423502 862 ntBASIC14.8□□□□□ -0.04
CDH3P22223 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 AC022210.1-201ENST00000449856 793 ntBASIC14.8□□□□□ -0.04
CDH3P22223 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.8□□□□□ -0.04
CDH3P22223 AC104989.1-201ENST00000519711 778 ntBASIC14.8□□□□□ -0.04
CDH3P22223 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.8□□□□□ -0.04
CDH3P22223 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH3P22223 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 AC133552.6-201ENST00000613406 534 ntBASIC14.8□□□□□ -0.04
CDH3P22223 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH3P22223 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH3P22223 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH3P22223 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms