Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KRT4P19013 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.12■□□□□ 0.01
KRT4P19013 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KRT4P19013 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
KRT4P19013 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT4P19013 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
KRT4P19013 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT4P19013 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KRT4P19013 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
KRT4P19013 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT4P19013 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.12■□□□□ 0.01
KRT4P19013 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KRT4P19013 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT4P19013 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.12■□□□□ 0.01
KRT4P19013 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.12■□□□□ 0.01
KRT4P19013 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.12■□□□□ 0.01
KRT4P19013 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.12■□□□□ 0.01
KRT4P19013 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT4P19013 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.12■□□□□ 0.01
KRT4P19013 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
KRT4P19013 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT4P19013 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT4P19013 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
KRT4P19013 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.12■□□□□ 0.01
KRT4P19013 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT4P19013 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.12■□□□□ 0.01
KRT4P19013 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT4P19013 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.12■□□□□ 0.01
KRT4P19013 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
KRT4P19013 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT4P19013 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KRT4P19013 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT4P19013 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KRT4P19013 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRT4P19013 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT4P19013 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
KRT4P19013 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.11■□□□□ 0.01
KRT4P19013 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.11■□□□□ 0.01
KRT4P19013 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRT4P19013 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT4P19013 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT4P19013 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRT4P19013 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.11■□□□□ 0.01
KRT4P19013 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRT4P19013 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT4P19013 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT4P19013 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT4P19013 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.11■□□□□ 0.01
KRT4P19013 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT4P19013 AC090505.1-201ENST00000430515 1834 ntBASIC15.11■□□□□ 0.01
KRT4P19013 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT4P19013 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.11■□□□□ 0.01
KRT4P19013 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT4P19013 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.11■□□□□ 0.01
KRT4P19013 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.11■□□□□ 0.01
KRT4P19013 AC009093.7-201ENST00000623853 1223 ntBASIC15.11■□□□□ 0.01
KRT4P19013 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.11■□□□□ 0.01
KRT4P19013 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT4P19013 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.11■□□□□ 0.01
KRT4P19013 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.11■□□□□ 0.01
KRT4P19013 AC130686.1-201ENST00000622936 2466 ntBASIC15.11■□□□□ 0.01
KRT4P19013 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT4P19013 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRT4P19013 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
KRT4P19013 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
KRT4P19013 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRT4P19013 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
KRT4P19013 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.11■□□□□ 0.01
KRT4P19013 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
KRT4P19013 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT4P19013 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT4P19013 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.11■□□□□ 0.01
KRT4P19013 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT4P19013 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRT4P19013 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.11■□□□□ 0.01
KRT4P19013 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT4P19013 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT4P19013 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.1■□□□□ 0.01
KRT4P19013 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
KRT4P19013 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
KRT4P19013 KRT8P22-201ENST00000562317 1415 ntBASIC15.1■□□□□ 0.01
KRT4P19013 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
KRT4P19013 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
KRT4P19013 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT4P19013 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
KRT4P19013 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT4P19013 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT4P19013 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT4P19013 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT4P19013 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT4P19013 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT4P19013 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT4P19013 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT4P19013 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT4P19013 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT4P19013 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
KRT4P19013 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.1■□□□□ 0.01
KRT4P19013 SPDYE7P-202ENST00000420373 878 ntBASIC15.1■□□□□ 0.01
KRT4P19013 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT4P19013 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms