Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.65■□□□□ 0.26
ATP2A2P16615 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP2A2P16615 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.65■□□□□ 0.26
ATP2A2P16615 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.65■□□□□ 0.26
ATP2A2P16615 AC005740.2-201ENST00000511085 419 ntBASIC16.65■□□□□ 0.26
ATP2A2P16615 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.65■□□□□ 0.26
ATP2A2P16615 PRKXP1-201ENST00000561423 1122 ntBASIC16.65■□□□□ 0.26
ATP2A2P16615 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ATP2A2P16615 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A2P16615 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A2P16615 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.65■□□□□ 0.26
ATP2A2P16615 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A2P16615 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A2P16615 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP2A2P16615 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
ATP2A2P16615 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A2P16615 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A2P16615 AC073347.1-201ENST00000421633 2643 ntBASIC16.65■□□□□ 0.26
ATP2A2P16615 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.65■□□□□ 0.26
ATP2A2P16615 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A2P16615 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
ATP2A2P16615 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.26
ATP2A2P16615 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP2A2P16615 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A2P16615 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A2P16615 OR2I1P-210ENST00000642037 4691 ntBASIC16.64■□□□□ 0.25
ATP2A2P16615 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.64■□□□□ 0.25
ATP2A2P16615 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A2P16615 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A2P16615 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A2P16615 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A2P16615 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.64■□□□□ 0.25
ATP2A2P16615 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A2P16615 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP2A2P16615 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP2A2P16615 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A2P16615 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A2P16615 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A2P16615 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ATP2A2P16615 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ATP2A2P16615 AC008267.1-201ENST00000474858 1069 ntBASIC16.64■□□□□ 0.25
ATP2A2P16615 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.64■□□□□ 0.25
ATP2A2P16615 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.64■□□□□ 0.25
ATP2A2P16615 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
ATP2A2P16615 AC005730.2-201ENST00000564549 1184 ntBASIC16.64■□□□□ 0.25
ATP2A2P16615 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.64■□□□□ 0.25
ATP2A2P16615 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.64■□□□□ 0.25
ATP2A2P16615 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A2P16615 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A2P16615 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.64■□□□□ 0.25
ATP2A2P16615 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A2P16615 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP2A2P16615 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ATP2A2P16615 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP2A2P16615 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
ATP2A2P16615 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A2P16615 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A2P16615 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A2P16615 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A2P16615 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
ATP2A2P16615 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP2A2P16615 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ATP2A2P16615 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ATP2A2P16615 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP2A2P16615 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
ATP2A2P16615 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A2P16615 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP2A2P16615 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A2P16615 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A2P16615 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A2P16615 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A2P16615 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ATP2A2P16615 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP2A2P16615 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A2P16615 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A2P16615 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A2P16615 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP2A2P16615 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A2P16615 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP2A2P16615 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A2P16615 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.63■□□□□ 0.25
ATP2A2P16615 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A2P16615 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.63■□□□□ 0.25
ATP2A2P16615 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP2A2P16615 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.63■□□□□ 0.25
ATP2A2P16615 AC022217.1-201ENST00000521069 738 ntBASIC16.63■□□□□ 0.25
ATP2A2P16615 AC024681.1-201ENST00000521917 487 ntBASIC16.63■□□□□ 0.25
ATP2A2P16615 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP2A2P16615 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.63■□□□□ 0.25
ATP2A2P16615 RN7SL574P-201ENST00000581512 297 ntBASIC16.63■□□□□ 0.25
ATP2A2P16615 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.63■□□□□ 0.25
ATP2A2P16615 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
ATP2A2P16615 AL133499.1-201ENST00000596207 608 ntBASIC16.63■□□□□ 0.25
ATP2A2P16615 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A2P16615 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A2P16615 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.63■□□□□ 0.25
ATP2A2P16615 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.63■□□□□ 0.25
ATP2A2P16615 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATP2A2P16615 AC008132.1-202ENST00000342005 1389 ntBASIC16.63■□□□□ 0.25
ATP2A2P16615 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms