Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CFTRP13569 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC24.77■■□□□ 1.56
CFTRP13569 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CFTRP13569 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CFTRP13569 PSAT1P2-201ENST00000426107 972 ntBASIC24.77■■□□□ 1.56
CFTRP13569 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC24.77■■□□□ 1.56
CFTRP13569 CHCHD2P2-201ENST00000503744 321 ntBASIC24.77■■□□□ 1.56
CFTRP13569 BCRP4-201ENST00000506079 804 ntBASIC24.77■■□□□ 1.56
CFTRP13569 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CFTRP13569 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC24.77■■□□□ 1.56
CFTRP13569 KNOP1P1-201ENST00000542108 989 ntBASIC24.77■■□□□ 1.56
CFTRP13569 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
CFTRP13569 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CFTRP13569 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CFTRP13569 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC24.77■■□□□ 1.56
CFTRP13569 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC24.77■■□□□ 1.56
CFTRP13569 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CFTRP13569 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CFTRP13569 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CFTRP13569 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC24.77■■□□□ 1.56
CFTRP13569 MPI-203ENST00000535694 1523 ntTSL 2 BASIC24.77■■□□□ 1.56
CFTRP13569 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CFTRP13569 AC092570.1-201ENST00000414446 469 ntBASIC24.77■■□□□ 1.56
CFTRP13569 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC24.77■■□□□ 1.56
CFTRP13569 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
CFTRP13569 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC24.77■■□□□ 1.56
CFTRP13569 RN7SL147P-201ENST00000487345 298 ntBASIC24.77■■□□□ 1.56
CFTRP13569 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CFTRP13569 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC24.77■■□□□ 1.56
CFTRP13569 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
CFTRP13569 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CFTRP13569 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CFTRP13569 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC24.76■■□□□ 1.55
CFTRP13569 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC24.76■■□□□ 1.55
CFTRP13569 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CFTRP13569 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC24.76■■□□□ 1.55
CFTRP13569 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC24.76■■□□□ 1.55
CFTRP13569 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CFTRP13569 AL365203.3-201ENST00000609742 2057 ntBASIC24.76■■□□□ 1.55
CFTRP13569 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CFTRP13569 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CFTRP13569 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CFTRP13569 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
CFTRP13569 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CFTRP13569 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
CFTRP13569 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
CFTRP13569 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CFTRP13569 KRT8P18-201ENST00000413425 1445 ntBASIC24.76■■□□□ 1.55
CFTRP13569 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CFTRP13569 KRT18P4-201ENST00000422599 1288 ntBASIC24.76■■□□□ 1.55
CFTRP13569 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC24.76■■□□□ 1.55
CFTRP13569 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC24.76■■□□□ 1.55
CFTRP13569 ALG1L7P-201ENST00000502317 768 ntBASIC24.76■■□□□ 1.55
CFTRP13569 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC24.76■■□□□ 1.55
CFTRP13569 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC24.76■■□□□ 1.55
CFTRP13569 VENTXP3-201ENST00000546480 773 ntBASIC24.76■■□□□ 1.55
CFTRP13569 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC24.76■■□□□ 1.55
CFTRP13569 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC24.76■■□□□ 1.55
CFTRP13569 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CFTRP13569 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CFTRP13569 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CFTRP13569 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC24.75■■□□□ 1.55
CFTRP13569 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CFTRP13569 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC24.75■■□□□ 1.55
CFTRP13569 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
CFTRP13569 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
CFTRP13569 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CFTRP13569 OR10N1P-201ENST00000392758 869 ntBASIC24.75■■□□□ 1.55
CFTRP13569 GRPEL2P1-201ENST00000453145 339 ntBASIC24.75■■□□□ 1.55
CFTRP13569 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC24.75■■□□□ 1.55
CFTRP13569 AC005740.1-201ENST00000515639 522 ntBASIC24.75■■□□□ 1.55
CFTRP13569 AC087203.1-201ENST00000532111 1181 ntBASIC24.75■■□□□ 1.55
CFTRP13569 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC24.75■■□□□ 1.55
CFTRP13569 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC24.75■■□□□ 1.55
CFTRP13569 MIR6816-201ENST00000620368 66 ntBASIC24.75■■□□□ 1.55
CFTRP13569 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CFTRP13569 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC24.75■■□□□ 1.55
CFTRP13569 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CFTRP13569 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CFTRP13569 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
CFTRP13569 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC24.75■■□□□ 1.55
CFTRP13569 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
CFTRP13569 PCDHA1-201ENST00000378133 2726 ntBASIC24.74■■□□□ 1.55
CFTRP13569 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CFTRP13569 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC24.74■■□□□ 1.55
CFTRP13569 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC24.74■■□□□ 1.55
CFTRP13569 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
CFTRP13569 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC24.74■■□□□ 1.55
CFTRP13569 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CFTRP13569 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
CFTRP13569 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
CFTRP13569 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC24.74■■□□□ 1.55
CFTRP13569 RPS18P9-201ENST00000482817 460 ntBASIC24.74■■□□□ 1.55
CFTRP13569 AC023906.1-201ENST00000486386 453 ntBASIC24.74■■□□□ 1.55
CFTRP13569 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC24.74■■□□□ 1.55
CFTRP13569 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CFTRP13569 AL160191.2-201ENST00000603975 601 ntBASIC24.74■■□□□ 1.55
CFTRP13569 RARS-210ENST00000626454 177 ntTSL 5 BASIC24.74■■□□□ 1.55
CFTRP13569 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CFTRP13569 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms