Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
FREM3P0C091 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.61□□□□□ -0.23
FREM3P0C091 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.61□□□□□ -0.23
FREM3P0C091 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 AC138466.3-201ENST00000619983 221 ntBASIC13.61□□□□□ -0.23
FREM3P0C091 AC008687.7-202ENST00000637404 953 ntBASIC13.61□□□□□ -0.23
FREM3P0C091 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
FREM3P0C091 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.61□□□□□ -0.23
FREM3P0C091 AC015656.1-201ENST00000624209 3578 ntBASIC13.61□□□□□ -0.23
FREM3P0C091 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.61□□□□□ -0.23
FREM3P0C091 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
FREM3P0C091 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 AC011840.2-201ENST00000563063 1520 ntBASIC13.61□□□□□ -0.23
FREM3P0C091 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
FREM3P0C091 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 WASH3P-207ENST00000560956 1394 ntBASIC13.61□□□□□ -0.23
FREM3P0C091 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.61□□□□□ -0.23
FREM3P0C091 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
FREM3P0C091 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.61□□□□□ -0.23
FREM3P0C091 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 FAM197Y7-201ENST00000432892 766 ntBASIC13.61□□□□□ -0.23
FREM3P0C091 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.61□□□□□ -0.23
FREM3P0C091 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
FREM3P0C091 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.61□□□□□ -0.23
FREM3P0C091 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.61□□□□□ -0.23
FREM3P0C091 RN7SL219P-201ENST00000582872 296 ntBASIC13.61□□□□□ -0.23
FREM3P0C091 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.61□□□□□ -0.23
FREM3P0C091 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.61□□□□□ -0.23
FREM3P0C091 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
FREM3P0C091 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.61□□□□□ -0.23
FREM3P0C091 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.61□□□□□ -0.23
FREM3P0C091 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.61□□□□□ -0.23
FREM3P0C091 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
FREM3P0C091 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM3P0C091 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
FREM3P0C091 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM3P0C091 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM3P0C091 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.6□□□□□ -0.23
FREM3P0C091 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
FREM3P0C091 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.6□□□□□ -0.23
FREM3P0C091 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.6□□□□□ -0.23
FREM3P0C091 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM3P0C091 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.6□□□□□ -0.23
FREM3P0C091 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
FREM3P0C091 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.6□□□□□ -0.23
FREM3P0C091 ACE3P-201ENST00000423435 1973 ntBASIC13.6□□□□□ -0.23
FREM3P0C091 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
FREM3P0C091 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
FREM3P0C091 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
FREM3P0C091 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
FREM3P0C091 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM3P0C091 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
FREM3P0C091 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM3P0C091 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.6□□□□□ -0.23
FREM3P0C091 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM3P0C091 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.6□□□□□ -0.23
FREM3P0C091 NKAIN1P1-201ENST00000435754 582 ntBASIC13.6□□□□□ -0.23
FREM3P0C091 GOLGA2P4-201ENST00000441462 777 ntBASIC13.6□□□□□ -0.23
FREM3P0C091 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.6□□□□□ -0.23
FREM3P0C091 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
FREM3P0C091 FTLP10-202ENST00000505798 471 ntBASIC13.6□□□□□ -0.23
FREM3P0C091 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
FREM3P0C091 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.6□□□□□ -0.23
FREM3P0C091 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.6□□□□□ -0.23
FREM3P0C091 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.6□□□□□ -0.23
FREM3P0C091 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.6□□□□□ -0.23
FREM3P0C091 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
FREM3P0C091 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.6□□□□□ -0.23
FREM3P0C091 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
FREM3P0C091 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM3P0C091 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.6□□□□□ -0.23
FREM3P0C091 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FREM3P0C091 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
FREM3P0C091 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.6□□□□□ -0.23
FREM3P0C091 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
FREM3P0C091 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.6□□□□□ -0.23
FREM3P0C091 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
FREM3P0C091 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
FREM3P0C091 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.6□□□□□ -0.23
FREM3P0C091 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms