Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CD48P09326 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.53■□□□□ 0.08
CD48P09326 RN7SL837P-201ENST00000463010 287 ntBASIC15.53■□□□□ 0.08
CD48P09326 AC106760.1-201ENST00000508690 800 ntBASIC15.53■□□□□ 0.08
CD48P09326 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.53■□□□□ 0.08
CD48P09326 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CD48P09326 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CD48P09326 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.53■□□□□ 0.08
CD48P09326 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.53■□□□□ 0.08
CD48P09326 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CD48P09326 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CD48P09326 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.53■□□□□ 0.08
CD48P09326 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
CD48P09326 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD48P09326 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD48P09326 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD48P09326 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD48P09326 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD48P09326 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.52■□□□□ 0.08
CD48P09326 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.52■□□□□ 0.08
CD48P09326 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD48P09326 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD48P09326 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD48P09326 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD48P09326 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.52■□□□□ 0.08
CD48P09326 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.52■□□□□ 0.08
CD48P09326 CLUHP2-201ENST00000426660 1303 ntBASIC15.52■□□□□ 0.08
CD48P09326 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.52■□□□□ 0.08
CD48P09326 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CD48P09326 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD48P09326 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD48P09326 AL138709.1-201ENST00000614840 1693 ntBASIC15.52■□□□□ 0.08
CD48P09326 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CD48P09326 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD48P09326 RN7SKP230-201ENST00000365642 335 ntBASIC15.52■□□□□ 0.08
CD48P09326 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD48P09326 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD48P09326 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.52■□□□□ 0.08
CD48P09326 AC007969.1-201ENST00000433675 447 ntBASIC15.52■□□□□ 0.08
CD48P09326 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.52■□□□□ 0.08
CD48P09326 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.52■□□□□ 0.08
CD48P09326 AC022447.6-201ENST00000515522 438 ntBASIC15.52■□□□□ 0.08
CD48P09326 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CD48P09326 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CD48P09326 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.52■□□□□ 0.08
CD48P09326 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD48P09326 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.52■□□□□ 0.08
CD48P09326 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.52■□□□□ 0.08
CD48P09326 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.52■□□□□ 0.08
CD48P09326 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CD48P09326 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.52■□□□□ 0.08
CD48P09326 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD48P09326 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.08
CD48P09326 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD48P09326 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CD48P09326 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
CD48P09326 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD48P09326 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.52■□□□□ 0.07
CD48P09326 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.52■□□□□ 0.07
CD48P09326 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
CD48P09326 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.52■□□□□ 0.07
CD48P09326 AC020910.5-201ENST00000623668 1865 ntBASIC15.52■□□□□ 0.07
CD48P09326 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD48P09326 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.52■□□□□ 0.07
CD48P09326 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.52■□□□□ 0.07
CD48P09326 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CD48P09326 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD48P09326 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD48P09326 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD48P09326 AGGF1P1-201ENST00000509500 2073 ntBASIC15.52■□□□□ 0.07
CD48P09326 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD48P09326 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
CD48P09326 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD48P09326 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD48P09326 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD48P09326 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.51■□□□□ 0.07
CD48P09326 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD48P09326 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.51■□□□□ 0.07
CD48P09326 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CD48P09326 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD48P09326 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CD48P09326 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD48P09326 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CD48P09326 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.51■□□□□ 0.07
CD48P09326 POM121L8P-201ENST00000417732 1281 ntBASIC15.51■□□□□ 0.07
CD48P09326 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms