Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.86■□□□□ 0.45
FOXN1O15353 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC17.86■□□□□ 0.45
FOXN1O15353 AC026410.1-201ENST00000507366 1101 ntBASIC17.86■□□□□ 0.45
FOXN1O15353 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC17.86■□□□□ 0.45
FOXN1O15353 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC17.86■□□□□ 0.45
FOXN1O15353 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
FOXN1O15353 AC244250.3-201ENST00000620749 366 ntBASIC17.86■□□□□ 0.45
FOXN1O15353 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC17.86■□□□□ 0.45
FOXN1O15353 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN1O15353 MRPL37P1-201ENST00000592451 1337 ntBASIC17.86■□□□□ 0.45
FOXN1O15353 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN1O15353 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
FOXN1O15353 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
FOXN1O15353 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN1O15353 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN1O15353 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
FOXN1O15353 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.86■□□□□ 0.45
FOXN1O15353 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
FOXN1O15353 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
FOXN1O15353 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
FOXN1O15353 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
FOXN1O15353 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.86■□□□□ 0.45
FOXN1O15353 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
FOXN1O15353 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN1O15353 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN1O15353 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
FOXN1O15353 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
FOXN1O15353 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN1O15353 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.86■□□□□ 0.45
FOXN1O15353 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.86■□□□□ 0.45
FOXN1O15353 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN1O15353 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FOXN1O15353 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN1O15353 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN1O15353 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN1O15353 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN1O15353 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN1O15353 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN1O15353 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
FOXN1O15353 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN1O15353 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.85■□□□□ 0.45
FOXN1O15353 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.85■□□□□ 0.45
FOXN1O15353 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.85■□□□□ 0.45
FOXN1O15353 AC004899.1-201ENST00000424687 1714 ntBASIC17.85■□□□□ 0.45
FOXN1O15353 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.85■□□□□ 0.45
FOXN1O15353 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC17.85■□□□□ 0.45
FOXN1O15353 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC17.85■□□□□ 0.45
FOXN1O15353 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN1O15353 KRT8P4-201ENST00000509735 1454 ntBASIC17.85■□□□□ 0.45
FOXN1O15353 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN1O15353 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.85■□□□□ 0.45
FOXN1O15353 AC090857.1-201ENST00000527400 390 ntBASIC17.85■□□□□ 0.45
FOXN1O15353 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
FOXN1O15353 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.85■□□□□ 0.45
FOXN1O15353 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN1O15353 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
FOXN1O15353 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN1O15353 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC17.85■□□□□ 0.45
FOXN1O15353 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC17.85■□□□□ 0.45
FOXN1O15353 AC073413.1-201ENST00000603927 732 ntBASIC17.85■□□□□ 0.45
FOXN1O15353 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN1O15353 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.85■□□□□ 0.45
FOXN1O15353 BX539320.1-201ENST00000623759 877 ntBASIC17.85■□□□□ 0.45
FOXN1O15353 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.85■□□□□ 0.45
FOXN1O15353 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXN1O15353 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.85■□□□□ 0.45
FOXN1O15353 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXN1O15353 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN1O15353 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN1O15353 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN1O15353 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN1O15353 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN1O15353 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN1O15353 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN1O15353 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.84■□□□□ 0.45
FOXN1O15353 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN1O15353 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
FOXN1O15353 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
FOXN1O15353 HCG27-204ENST00000424675 895 ntTSL 3 BASIC17.84■□□□□ 0.45
FOXN1O15353 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.84■□□□□ 0.45
FOXN1O15353 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN1O15353 TUBB8P8-201ENST00000458717 1058 ntBASIC17.84■□□□□ 0.45
FOXN1O15353 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC17.84■□□□□ 0.45
FOXN1O15353 SCARNA21-201ENST00000517026 139 ntBASIC17.84■□□□□ 0.45
FOXN1O15353 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.84■□□□□ 0.45
FOXN1O15353 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN1O15353 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN1O15353 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
FOXN1O15353 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN1O15353 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN1O15353 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN1O15353 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.84■□□□□ 0.45
FOXN1O15353 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXN1O15353 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN1O15353 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
FOXN1O15353 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXN1O15353 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
FOXN1O15353 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXN1O15353 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXN1O15353 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms