Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 RN7SKP175-201ENST00000408472 289 ntBASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 AP003171.2-201ENST00000528208 925 ntBASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 AC020910.5-201ENST00000623668 1865 ntBASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 AC023908.3-201ENST00000564211 3047 ntBASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGC3Q9UN70 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 AL136172.1-201ENST00000598590 1394 ntBASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 AC006001.1-201ENST00000325130 474 ntBASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 AC022447.6-201ENST00000515522 438 ntBASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 AC078819.1-201ENST00000547454 765 ntBASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 AC012085.1-201ENST00000548270 765 ntBASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 AC007686.3-201ENST00000619017 3487 ntBASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGC3Q9UN70 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 BX640514.1-201ENST00000583223 1918 ntBASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 FAM8A4P-201ENST00000435433 1213 ntBASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
PCDHGC3Q9UN70 AP000812.2-201ENST00000538934 718 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms