Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SPASTQ9UBP0 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SPASTQ9UBP0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SPASTQ9UBP0 RPL5P21-201ENST00000404620 815 ntBASIC15.02■□□□□ -0
SPASTQ9UBP0 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.02■□□□□ -0
SPASTQ9UBP0 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.02■□□□□ -0
SPASTQ9UBP0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.02■□□□□ -0
SPASTQ9UBP0 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.02■□□□□ -0
SPASTQ9UBP0 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.02■□□□□ -0
SPASTQ9UBP0 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.02■□□□□ -0
SPASTQ9UBP0 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.02■□□□□ -0
SPASTQ9UBP0 AC148477.4-201ENST00000613430 1793 ntBASIC15.02□□□□□ -0.01
SPASTQ9UBP0 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPASTQ9UBP0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPASTQ9UBP0 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPASTQ9UBP0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SPASTQ9UBP0 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPASTQ9UBP0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
SPASTQ9UBP0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPASTQ9UBP0 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.02□□□□□ -0.01
SPASTQ9UBP0 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.02□□□□□ -0.01
SPASTQ9UBP0 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SPASTQ9UBP0 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
SPASTQ9UBP0 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
SPASTQ9UBP0 AL354989.2-201ENST00000435838 1540 ntBASIC15.02□□□□□ -0.01
SPASTQ9UBP0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.02□□□□□ -0.01
SPASTQ9UBP0 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 AC067750.1-201ENST00000608826 6545 ntBASIC15.01□□□□□ -0.01
SPASTQ9UBP0 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 MIR326-201ENST00000362220 95 ntBASIC15.01□□□□□ -0.01
SPASTQ9UBP0 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 BTBD6P1-201ENST00000412176 1267 ntBASIC15.01□□□□□ -0.01
SPASTQ9UBP0 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 FAM86HP-204ENST00000513466 959 ntBASIC15.01□□□□□ -0.01
SPASTQ9UBP0 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.01□□□□□ -0.01
SPASTQ9UBP0 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 AC103810.3-201ENST00000583567 96 ntBASIC15.01□□□□□ -0.01
SPASTQ9UBP0 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 AC243960.2-201ENST00000600996 747 ntBASIC15.01□□□□□ -0.01
SPASTQ9UBP0 ECM1P1-201ENST00000604092 1279 ntBASIC15.01□□□□□ -0.01
SPASTQ9UBP0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPASTQ9UBP0 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SPASTQ9UBP0 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15□□□□□ -0.01
SPASTQ9UBP0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15□□□□□ -0.01
SPASTQ9UBP0 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPASTQ9UBP0 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SPASTQ9UBP0 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPASTQ9UBP0 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPASTQ9UBP0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPASTQ9UBP0 AL158070.2-201ENST00000623713 1621 ntBASIC15□□□□□ -0.01
SPASTQ9UBP0 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPASTQ9UBP0 AC006486.2-201ENST00000624246 2199 ntBASIC15□□□□□ -0.01
SPASTQ9UBP0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SPASTQ9UBP0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPASTQ9UBP0 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SPASTQ9UBP0 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15□□□□□ -0.01
SPASTQ9UBP0 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms